RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 GPRC5BQ9NZH0 403 aa16.64■□□□□ 0.25
PCF11-206ENST00000533018 ZNF835Q9Y2P0 537 aa16.64■□□□□ 0.25
PCF11-206ENST00000533018 CACNA1CQ13936 2221 aa16.64■□□□□ 0.25
PCF11-206ENST00000533018 CXorf49A8MYA2 514 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 KLRC4-KLRK1H3BQV0 150 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 PRRG2O14669 202 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 TFECO14948 347 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 PHGDHO43175 533 aaKnown RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 S100BP04271 92 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 STMN1P16949 149 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 GSTM2P28161 218 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 PPP2R1BP30154 601 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 TRHRP34981 398 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 RFC3P40938 356 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 HSPA7P48741 367 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 MEOX1P50221 254 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 RAB38P57729 211 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 ILF2Q12905 390 aaKnown RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 ZNF630Q2M218 657 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 XKR6Q5GH73 641 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 Q6ZPB1 254 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 CLNKQ7Z7G1 428 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 SIAH3Q8IW03 269 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 CYP4Z2PQ8N1L4 340 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 APCDD1LQ8NCL9 501 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 AGAP11Q8TF27 550 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 ANP32BQ92688 251 aaKnown RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 EXT2Q93063 718 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 ESAMQ96AP7 390 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 VMP1Q96GC9 406 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 TMEM79Q9BSE2 394 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 CD274Q9NZQ7 290 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 RNF14Q9UBS8 474 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 KLF13Q9Y2Y9 288 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 MEMO1Q9Y316 297 aa16.63■□□□□ 0.25
PCF11-206ENST00000533018 NCOA6Q14686 2063 aaPredicted RBP16.63■□□□□ 0.25
PCF11-206ENST00000533018 CSMD2Q7Z408 3487 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 TAPBPO15533 448 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 CDC40O60508 579 aaKnown RBP eCLIP16.62■□□□□ 0.252e-10■■■■□ 21.6
PCF11-206ENST00000533018 ITGA10O75578 1167 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 CLEC3AO75596 197 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 STK16O75716 305 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 IFNA16P05015 189 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 HSD17B7P56937 341 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 BMPR2Q13873 1038 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 HIST2H2ACQ16777 129 aaPredicted RBP16.62■□□□□ 0.25
PCF11-206ENST00000533018 RNFT1Q5M7Z0 435 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 HIST2H2AA3Q6FI13 130 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 SULT1C3Q6IMI6 304 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 C3P1Q6ZMU1 363 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 ZNF227Q86WZ6 799 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 SULF2Q8IWU5 870 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 SCUBE1Q8IWY4 988 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 OR2L5Q8NG80 312 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 ADAMTS18Q8TE60 1221 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 NCLNQ969V3 563 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 PITHD1Q9GZP4 211 aaPredicted RBP16.62■□□□□ 0.25
PCF11-206ENST00000533018 NT5DC2Q9H857 520 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 TRIM45Q9H8W5 580 aaPredicted RBP16.62■□□□□ 0.25
PCF11-206ENST00000533018 RNF112Q9ULX5 631 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 ERVK-11Q9UQG0 969 aa16.62■□□□□ 0.25
PCF11-206ENST00000533018 PEX1O43933 1283 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 CCNT2O60583 730 aaKnown RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 CLDN14O95500 239 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 CD1DP15813 335 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 CERS1P27544 350 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 PTGER1P34995 402 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 HNRNPFP52597 415 aaKnown RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 ATP6V0D1P61421 351 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 TERF2Q15554 542 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 OR4D1Q15615 310 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 PDK4Q16654 411 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 C3orf62Q6ZUJ4 267 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 NCCRP1Q6ZVX7 275 aaPredicted RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 GDF7Q7Z4P5 450 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 MAATS1Q7Z4T9 603 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 CTAGE3PQ8IX95 158 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 ZNF595Q8IYB9 648 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 POGLUT1Q8NBL1 392 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 TMEM52Q8NDY8 209 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 SREK1Q8WXA9 508 aaKnown RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 PTCD3Q96EY7 689 aaKnown RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 SEC16BQ96JE7 1060 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 PHF12Q96QT6 1004 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 SERINC2Q96SA4 455 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 CPNE1Q99829 537 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 MCMBPQ9BTE3 642 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 LIN28AQ9H9Z2 209 aaKnown RBP16.61■□□□□ 0.25
PCF11-206ENST00000533018 CLCA3PQ9Y6N3 262 aa16.61■□□□□ 0.25
PCF11-206ENST00000533018 MYOCOSA0A1B0GUC4 107 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 FAM187AA6NFU0 413 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 ZFAND5O76080 213 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 TPOP07202 933 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 TNNI3P19429 210 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 AGAP20933 346 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 PTGER4P35408 488 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 GGT5P36269 586 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 SSR4P51571 173 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 MTTPP55157 894 aa16.6■□□□□ 0.25
PCF11-206ENST00000533018 LIM2P55344 173 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms