RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 RNF165Q6ZSG1 346 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 PAGE2Q7Z2X7 111 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 METTL4Q8N3J2 472 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZCCHC7Q8N3Z6 543 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZNF781Q8N8C0 355 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 ACOT4Q8N9L9 421 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZSCAN1Q8NBB4 408 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 OR5T3Q8NGG3 340 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 STT3BQ8TCJ2 826 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 SORBS1Q9BX66 1292 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 TGIF2Q9GZN2 237 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 FAM107BQ9H098 131 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 DDX31Q9H8H2 851 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 CTSFQ9UBX1 484 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 IL17BQ9UHF5 180 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 TCFL5Q9UL49 500 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 PTRH2Q9Y3E5 179 aaKnown RBP10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 DNAJC15Q9Y5T4 150 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 SPACA6W5XKT8 324 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 FREM2Q5SZK8 3169 aa10.63□□□□□ -0.71
TRAPPC4-211ENST00000533012 HEATR5BQ9P2D3 2071 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 A0A087WV48 116 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 TMEM233B4DJY2 109 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 TERTO14746 1132 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SNNO75324 88 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 KLF7O75840 302 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 RSL1D1O76021 490 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 BMP10O95393 424 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 RECKO95980 971 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 KLK1P06870 262 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 LINC00032P0C843 101 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 RNH1P13489 461 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CERS1P27544 350 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 BSGP35613 385 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 FOLR3P41439 243 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 XCR1P46094 333 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 UCNP55089 124 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 HMGCS1Q01581 520 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 MC1RQ01726 317 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 BTKQ06187 659 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 TBL3Q12788 808 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SSPNQ14714 243 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CCNYL2Q5T2Q4 361 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 FAM219BQ5XKK7 198 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 ZNF793Q6ZN11 406 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CCDC81Q6ZN84 652 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 NUDT13Q86X67 352 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 DDIASQ8IXT1 998 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 PRSS58Q8IYP2 241 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CA13Q8N1Q1 262 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 OR2Y1Q8NGV0 311 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 ADAMTS18Q8TE60 1221 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CHTF18Q8WVB6 975 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 TWIST2Q8WVJ9 160 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 CKAP2Q8WWK9 683 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 TBC1D20Q96BZ9 403 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 PEX11GQ96HA9 241 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SLC45A3Q96JT2 553 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 MAGEB18Q96M61 343 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 OR1F2PQ96R84 312 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SORT1Q99523 831 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 MRPL1Q9BYD6 325 aaKnown RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 ACPTQ9BZG2 426 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 ACTL8Q9H568 366 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SOX17Q9H6I2 414 aaPredicted RBP10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 LYRM4Q9HD34 91 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 C14orf105Q9NVL8 296 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 PNPOQ9NVS9 261 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 MS4A12Q9NXJ0 267 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 HAO1Q9UJM8 370 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 ADAM29Q9UKF5 820 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 DAPP1Q9UN19 280 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SSUH2Q9Y2M2 353 aa10.62□□□□□ -0.71
TRAPPC4-211ENST00000533012 SLCO1B7G3V0H7 640 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CLDN4O14493 209 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 PIP5K1BO14986 540 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 EFSO43281 561 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 EEDO75530 441 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 CREG1O75629 220 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 MYO1DO94832 1006 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SCELO95171 688 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 IGHEP01854 428 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 HEXBP07686 556 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 FHP07954 510 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 JAK1P23458 1154 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 TLX1P31314 330 aaPredicted RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 EMP2P54851 167 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 LIM2P55344 173 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 RAB38P57729 211 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 RPS18P62269 152 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 GNGT1P63211 74 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 TLE3Q04726 772 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 KLC1Q07866 573 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ACSM2AQ08AH3 577 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SRSF6Q13247 344 aaKnown RBP10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ERV3-1Q14264 604 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SPIN4Q56A73 249 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 MFSD4BQ5TF39 518 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 ACSM2BQ68CK6 577 aa10.61□□□□□ -0.71
TRAPPC4-211ENST00000533012 SHISA6Q6ZSJ9 500 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms