RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 HMGCS1Q01581 520 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 TGM3Q08188 693 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BST1Q10588 318 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CUL3Q13618 768 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 RUNX2Q13950 521 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 AP5B1Q2VPB7 878 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ATP1A1-AS1Q5TC04 95 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BROXQ5VW32 411 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 OR4C11Q6IEV9 310 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CCDC81Q6ZN84 652 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SRFBP1Q8NEF9 429 aaKnown RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FKBP10Q96AY3 582 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MIEF2Q96C03 454 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SLC45A3Q96JT2 553 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SERPINI1Q99574 410 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 COPS7BQ9H9Q2 264 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 TRAF6Q9Y4K3 522 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PCDHGA6Q9Y5G7 932 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PTGDR2Q9Y5Y4 395 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 USP24Q9UPU5 2620 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 VSTM2BA6NLU5 285 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FAM227AF5H4B4 570 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 EBAG9O00559 213 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CREG1O75629 220 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CDC123O75794 336 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BMP10O95393 424 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PRKAR1AP10644 381 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 GRK2P25098 689 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ATP5A1P25705 553 aaKnown RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SERPINB5P36952 375 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SSR2P43308 183 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 XCR1P46094 333 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MTTPP55157 894 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SKP1P63208 163 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 KLC1Q07866 573 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 GALNT1Q10472 559 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 C10orf62Q5T681 223 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ACOT4Q8N9L9 421 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CRELD1Q96HD1 420 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SERINC2Q96SA4 455 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SPSB2Q99619 263 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CENPKQ9BS16 269 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 TBCDQ9BTW9 1192 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 EFHD1Q9BUP0 239 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ZNF717Q9BY31 904 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ACPTQ9BZG2 426 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SLC26A1Q9H2B4 701 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BRF2Q9HAW0 419 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MKKSQ9NPJ1 570 aaPredicted RBP11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PPT2Q9UMR5 302 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PADI2Q9Y2J8 665 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 DNAJC15Q9Y5T4 150 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 PTPRQQ9UMZ3 2332 aa11.27□□□□□ -0.61
TRAF3IP2-212ENST00000532708 IGLV3-12A0A075B6K2 115 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 A0A088AWK7 358 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 TMEM114B3SHH9 223 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 B3GALT2O43825 422 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 EEDO75530 441 aaKnown RBP11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 UMODP07911 640 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FGF4P08620 206 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FURINP09958 794 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 NR1D1P20393 614 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ZNF10P21506 573 aaPredicted RBP11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 HIST1H1TP22492 207 aaPredicted RBP11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BSGP35613 385 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MNAT1P51948 309 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 BTKQ06187 659 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SLAMF1Q13291 335 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 IL10RAQ13651 578 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 UGT3A2Q3SY77 523 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MFSD4BQ5TF39 518 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 KANK2Q63ZY3 851 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 NIPAL1Q6NVV3 410 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 C19orf48Q6RUI8 117 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ZC3H7AQ8IWR0 971 aaKnown RBP11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CLYBLQ8N0X4 340 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CA13Q8N1Q1 262 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 ZNF781Q8N8C0 355 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 OR2Y1Q8NGV0 311 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 SORT1Q99523 831 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 TUBB1Q9H4B7 451 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MANSC1Q9H8J5 431 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 VPS29Q9UBQ0 182 aa11.26□□□□□ -0.61
TRAF3IP2-212ENST00000532708 B4GALT2O60909 372 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 LINC00032P0C843 101 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FOLR3P41439 243 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 EFNA3P52797 238 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CSTF3Q12996 717 aaKnown RBP11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MINDY4Q4G0A6 757 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MAPKAP1Q9BPZ7 522 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MESP1Q9BRJ9 268 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 WDR54Q9H977 334 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 INTS9Q9NV88 658 aaKnown RBP11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 FBXW2Q9UKT8 454 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 MKL2Q9ULH7 1088 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 NBEAQ8NFP9 2946 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 EPG5Q9HCE0 2579 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 KLK1P06870 262 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 CD63P08962 238 aa11.25□□□□□ -0.61
TRAF3IP2-212ENST00000532708 HSD3B1P14060 373 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms