RNA–Protein interactions for RNA: ENST00000532501.2

TRIM49-202, Transcript of tripartite motif containing 49, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIM49, Length 1,437 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49-202ENST00000532501 ATP1A1-AS1Q5TC04 95 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 KHDRBS2Q5VWX1 349 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 TLDC1Q6P9B6 456 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CYB5D1Q6P9G0 228 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 UNQ6494/PRO21346Q6UXR6 183 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CRLF3Q8IUI8 442 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 ZC3H7AQ8IWR0 971 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CLYBLQ8N0X4 340 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 C1orf52Q8N6N3 182 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 TTC29Q8NA56 475 aaPredicted RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 TRPV3Q8NET8 790 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 TTLQ8NG68 377 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 MR1Q95460 341 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 GAL3ST3Q96A11 431 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CLIP3Q96DZ5 547 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 THOC1Q96FV9 657 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CRELD1Q96HD1 420 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 FAR2Q96K12 515 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 C7orf26Q96N11 449 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 REXO4Q9GZR2 422 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 ELOVL6Q9H5J4 265 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 FANCEQ9HB96 536 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 ADGRE2Q9UHX3 823 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 RALYQ9UKM9 306 aaKnown RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 SNX6Q9UNH7 406 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 SLC12A4Q9UP95 1085 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 DLGAP4Q9Y2H0 992 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 RAXQ9Y2V3 346 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 RAP2CQ9Y3L5 183 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 CLDN16Q9Y5I7 305 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 MGAQ8IWI9 3026 aa7.56□□□□□ -1.2
TRIM49-202ENST00000532501 KMT2BQ9UMN6 2715 aaPredicted RBP7.56□□□□□ -1.2
TRIM49-202ENST00000532501 A0A0A6YYD5 115 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MYOCOSA0A1B0GUC4 107 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 FOXE1O00358 373 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SDHDO14521 159 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 POLR3GO15318 223 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 CHST10O43529 356 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SCELO95171 688 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 NSA2O95478 260 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ONECUT2O95948 504 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KRT6AP02538 564 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KRT6BP04259 564 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 UMODP07911 640 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 FGF4P08620 206 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 FURINP09958 794 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KITP10721 976 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 UROSP10746 265 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 CD1EP15812 388 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TACR1P25103 407 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ATP5A1P25705 553 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ITPKBP27987 946 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TPP2P29144 1249 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SERPINB1P30740 379 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 STAT5AP42229 794 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KRT6CP48668 564 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 RGS1Q08116 209 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 IFT88Q13099 833 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 IL10RAQ13651 578 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KIAA0040Q15053 153 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MUM1Q2TAK8 710 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ARHGAP40Q5TG30 622 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 GARNL3Q5VVW2 1013 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MRM1Q6IN84 353 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MRPL14Q6P1L8 145 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 C6orf15Q6UXA7 325 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 COMMD6Q7Z4G1 85 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 WDR75Q8IWA0 830 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 CACNA2D3Q8IZS8 1091 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 CA13Q8N1Q1 262 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 METTL4Q8N3J2 472 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ACOT4Q8N9L9 421 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 OR2L5Q8NG80 312 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TSLPQ969D9 159 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MMABQ96EY8 250 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 PEX11GQ96HA9 241 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 LRFN5Q96NI6 719 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 CCT7Q99832 543 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 MAPKAP1Q9BPZ7 522 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 NDC1Q9BTX1 674 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 EBPLQ9BY08 206 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 NUF2Q9BZD4 464 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ASPSCR1Q9BZE9 553 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 WDR55Q9H6Y2 383 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 PRM3Q9NNZ6 103 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 THSD1Q9NS62 852 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 LANCL2Q9NS86 450 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TXLNGQ9NUQ3 528 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TEX10Q9NXF1 929 aaPredicted RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 KCMF1Q9P0J7 381 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SRPK3Q9UPE1 567 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 EXO1Q9UQ84 846 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SLC22A7Q9Y694 548 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 ZFYVE26Q68DK2 2539 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 SCN3AQ9NY46 2000 aa7.55□□□□□ -1.2
TRIM49-202ENST00000532501 DSPP15924 2871 aaKnown RBP7.55□□□□□ -1.2
TRIM49-202ENST00000532501 TCP11X1B4DZS4 312 aa7.54□□□□□ -1.2
TRIM49-202ENST00000532501 STMND1H3BQB6 276 aa7.54□□□□□ -1.2
TRIM49-202ENST00000532501 LSM1O15116 133 aaKnown RBP7.54□□□□□ -1.2
TRIM49-202ENST00000532501 CDC123O75794 336 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms