RNA–Protein interactions for RNA: ENST00000530004.5

TTC39A-216, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best) BASIC

Gene TTC39A, Length 1,780 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-216ENST00000530004 CCNYL2Q5T2Q4 361 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 NANOGP8Q6NSW7 305 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 FIGLAQ6QHK4 219 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 DNAJC14Q6Y2X3 702 aaPredicted RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 FAM92BQ6ZTR7 304 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 MSANTD1Q6ZTZ1 278 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 PAGE2Q7Z2X7 111 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 SLCO6A1Q86UG4 719 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 TMEM132CQ8N3T6 1108 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 TRPV3Q8NET8 790 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 OR4D9Q8NGE8 314 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 OR8J2Q8NGG1 315 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 ITCHQ96J02 903 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 FCRL4Q96PJ5 515 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 CGREF1Q99674 301 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 MACROD1Q9BQ69 325 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 AICDAQ9GZX7 198 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 KLHL25Q9H0H3 589 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 NANOGQ9H9S0 305 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 MYNNQ9NPC7 610 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 LHX9Q9NQ69 397 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 C1GALT1Q9NS00 363 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 PDP2Q9P2J9 529 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 SUCOQ9UBS9 1254 aaKnown RBP13.7□□□□□ -0.22
TTC39A-216ENST00000530004 KLHL3Q9UH77 587 aa13.7□□□□□ -0.22
TTC39A-216ENST00000530004 PCNX2A6NKB5 2137 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 HEATR5BQ9P2D3 2071 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 C15orf38-AP3S2A0A0A6YYH1 394 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 ARHGAP10A1A4S6 786 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 TLCD2A6NGC4 264 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 GABRR3A8MPY1 467 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 KRT36O76013 467 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 FTH1P19P0C7X4 201 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 PLA2G5P39877 138 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 PLA2G16P53816 162 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 SIM1P81133 766 aaPredicted RBP13.69□□□□□ -0.22
TTC39A-216ENST00000530004 MS4A2Q01362 244 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 C2orf80Q0P641 193 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 HYAL2Q12891 473 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 FLOT2Q14254 428 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 TMEM35AQ53FP2 167 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 CPTPQ5TA50 214 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 FCRL6Q6DN72 434 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 UBE3DQ7Z6J8 389 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 ARPINQ7Z6K5 226 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 ANKRD46Q86W74 232 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 NUDT13Q86X67 352 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 HIPK4Q8NE63 616 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 QRFPRQ96P65 431 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 PRPF18Q99633 342 aaKnown RBP13.69□□□□□ -0.22
TTC39A-216ENST00000530004 C17orf62Q9BQA9 187 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 KLHL31Q9H511 634 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 REEP4Q9H6H4 257 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 SERHLQ9NQF3 203 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 VAPAQ9P0L0 249 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 ANKMY1Q9P2S6 941 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 GMPR2Q9P2T1 348 aaKnown RBP13.69□□□□□ -0.22
TTC39A-216ENST00000530004 EXO1Q9UQ84 846 aaKnown RBP13.69□□□□□ -0.22
TTC39A-216ENST00000530004 MAN2B2Q9Y2E5 1009 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 NEUROG3Q9Y4Z2 214 aa13.69□□□□□ -0.22
TTC39A-216ENST00000530004 A0A0G2JN53 185 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 IGHV5-10-1A0A0J9YXX1 117 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 H0Y3Z8 333 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 PSMG1O95456 288 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 IL3P08700 152 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 LAMP1P11279 417 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 CDK4P11802 303 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 PVRP15151 417 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SDHBP21912 280 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 MAPK12P53778 367 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 WNT3P56703 355 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 INSM1Q01101 510 aaPredicted RBP13.68□□□□□ -0.22
TTC39A-216ENST00000530004 MC1RQ01726 317 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 TRIM25Q14258 630 aaKnown RBP13.68□□□□□ -0.22
TTC39A-216ENST00000530004 ADPRMQ3LIE5 342 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 TOR1AIP1Q5JTV8 583 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SNAP47Q5SQN1 464 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 FAM71E1Q6IPT2 247 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 FBXO42Q6P3S6 717 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 PRSS42Q7Z5A4 293 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 CAMKMTQ7Z624 323 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SLITRK4Q8IW52 837 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 CARFQ8N187 725 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 JADE3Q92613 823 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 ZUFSPQ96AP4 578 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 MS4A6EQ96DS6 147 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 ASB9Q96DX5 294 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 TRAPPC9Q96Q05 1148 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 INPP5KQ9BT40 448 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 DUSP26Q9BV47 211 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 PAIP1Q9H074 479 aaKnown RBP13.68□□□□□ -0.22
TTC39A-216ENST00000530004 PCDHAC1Q9H158 963 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SEMA6CQ9H3T2 930 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 RNPEPL1Q9HAU8 725 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 FAM120CQ9NX05 1096 aaKnown RBP13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SH3BP4Q9P0V3 963 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 SEMA5BQ9P283 1151 aa13.68□□□□□ -0.22
TTC39A-216ENST00000530004 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.68□□□□□ -0.22
TTC39A-216ENST00000530004 ATP6V1HQ9UI12 483 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms