RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 NEUROD4Q9HD90 331 aa11.41□□□□□ -0.58
SRPRA-202ENST00000527817 PNO1Q9NRX1 252 aaKnown RBP11.41□□□□□ -0.58
SRPRA-202ENST00000527817 MYOTQ9UBF9 498 aa11.41□□□□□ -0.58
SRPRA-202ENST00000527817 CBLCQ9ULV8 474 aa11.41□□□□□ -0.58
SRPRA-202ENST00000527817 LIPGQ9Y5X9 500 aa11.41□□□□□ -0.58
SRPRA-202ENST00000527817 ATRQ13535 2644 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 MAGEB16A2A368 324 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SLC16A5O15375 505 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 HCN1O60741 890 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 OR2J2O76002 312 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 OR6B1O95007 311 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 C8GP07360 202 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 EPXP11678 715 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 UQCRC1P31930 480 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 MAGEA5P43359 124 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SCTRP47872 440 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 BASP1P80723 227 aaKnown RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 FOXO1Q12778 655 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 CTBP1Q13363 440 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ZNF750Q32MQ0 723 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 HECTD2Q5U5R9 776 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 LRRC8EQ6NSJ5 796 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 C16orf47Q6ZP98 133 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 CHSY3Q70JA7 882 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SLC13A5Q86YT5 568 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 CPNE9Q8IYJ1 553 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 CA13Q8N1Q1 262 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SPATA3Q8NHX4 192 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 RNASE6Q93091 150 aaKnown RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ALKBH8Q96BT7 664 aaKnown RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SNF8Q96H20 258 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 PDLIM2Q96JY6 352 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SGCZQ96LD1 299 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 RASL10BQ96S79 203 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SH3GL2Q99962 352 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 RHBGQ9H310 441 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 LDAHQ9H6V9 325 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 PLEKHF2Q9H8W4 249 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ALKBH4Q9NXW9 302 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 SAMD15Q9P1V8 674 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 FOXD3Q9UJU5 478 aaPredicted RBP11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ADAMTS6Q9UKP5 1117 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 CLDN16Q9Y5I7 305 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ARID1AO14497 2285 aa11.4□□□□□ -0.58
SRPRA-202ENST00000527817 ARHGAP21Q5T5U3 1957 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 A0A0G2JMM0 328 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 A0A1W2PPB8 328 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 A0A1W2PRS3 328 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 KIR3DP1A8MWS1 328 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 KIAA1324LA8MWY0 1029 aaPredicted RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 AVILO75366 819 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 TPSB2P20231 275 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 SOX3P41225 446 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 ASCL1P50553 236 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 HSD17B7P56937 341 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 RAB8AP61006 207 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 THOC5Q13769 683 aaKnown RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 TPSAB1Q15661 275 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 CCNG2Q16589 344 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 SEL1L2Q5TEA6 688 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 SHEQ5VZ18 495 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 DUPD1Q68J44 220 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 ZNF470Q6ECI4 717 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 DRICH1Q6PGQ1 229 aaPredicted RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 MBOAT1Q6ZNC8 495 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 RTL4Q6ZR62 310 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 DENND6AQ8IWF6 608 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 SCUBE1Q8IWY4 988 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 PALM2Q8IXS6 379 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 TMEM132CQ8N3T6 1108 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 GOLM1Q8NBJ4 401 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 TRPV3Q8NET8 790 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 OR56A3Q8NH54 315 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 NUDT8Q8WV74 236 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 EEF1AKMT1Q8WVE0 214 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 SLCO2A1Q92959 643 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 AARSD1Q9BTE6 412 aaKnown RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 CNPPD1Q9BV87 410 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 KLHL31Q9H511 634 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 LIN28AQ9H9Z2 209 aaKnown RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 FBXO6Q9NRD1 293 aaPredicted RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 FBN1P35555 2871 aaKnown RBP11.39□□□□□ -0.59
SRPRA-202ENST00000527817 HIVEP2P31629 2446 aa11.39□□□□□ -0.59
SRPRA-202ENST00000527817 STAB1Q9NY15 2570 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 TRGV5A0A0B4J1U4 118 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 ATP6AP2A0A1C7CYW4 349 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 TCRBV7S3A2A0A539 114 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SYNDIG1LA6NDD5 238 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 CLDN4O14493 209 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 DVL2O14641 736 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 ATP6AP2O75787 350 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HAUS5O94927 633 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 GOSR1O95249 250 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 LY6G6DO95868 133 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 SERPINA6P08185 405 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 CELA3AP09093 270 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HIST1H2AGP0C0S8 130 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 HIST1H2ADP20671 130 aa11.38□□□□□ -0.59
SRPRA-202ENST00000527817 CEACAM8P31997 349 aaPredicted RBP11.38□□□□□ -0.59
SRPRA-202ENST00000527817 RGS4P49798 205 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms