RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 BBS7Q8IWZ6 715 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 OR4K1Q8NGD4 311 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 ZSWIM3Q96MP5 696 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 TRNT1Q96Q11 434 aaKnown RBP12□□□□□ -0.49
CAPN1-208ENST00000527323 ZBP1Q9H171 429 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 CLN6Q9NWW5 311 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 CORO2BQ9UQ03 480 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 BOLA1Q9Y3E2 137 aa12□□□□□ -0.49
CAPN1-208ENST00000527323 PIKFYVEQ9Y2I7 2098 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 PLXNA3P51805 1871 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 PLXNA4Q9HCM2 1894 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 FAM172BPA6NC97 362 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 H3BM21 787 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 SLITRK5O94991 958 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 HTR3AP46098 478 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 SLC6A12P48065 614 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 GAB1Q13480 694 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 STARD3Q14849 445 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 EIF4HQ15056 248 aaKnown RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TAB1Q15750 504 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF648Q5T619 568 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 VASH1Q7L8A9 365 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TSEN54Q7Z6J9 526 aaKnown RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 RAB43Q86YS6 212 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 NPAS3Q8IXF0 933 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 OR6F1Q8NGZ6 308 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 C9orf43Q8TAL5 461 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 VPS35Q96QK1 796 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 IL4I1Q96RQ9 567 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 C2orf49Q9BVC5 232 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 ASPNQ9BXN1 380 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 NKX2-4Q9H2Z4 354 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 CCDC177Q9NQR7 707 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 FKBP14Q9NWM8 211 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TAS2R9Q9NYW1 312 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 RHCGQ9UBD6 479 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 MBD1Q9UIS9 605 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 MN1Q10571 1320 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 ARHGAP33O14559 1287 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 PCDH17O14917 1159 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 SCAMP2O15127 329 aaKnown RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 EPHB3P54753 998 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TSTA3Q13630 321 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 VEPH1Q14D04 833 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 PTGES3Q15185 160 aaKnown RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 LRRC73Q5JTD7 316 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 COX20Q5RI15 118 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 ANXA8L1Q5VT79 327 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 CRTC1Q6UUV9 634 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF517Q6ZMY9 492 aaPredicted RBP11.99□□□□□ -0.49
CAPN1-208ENST00000527323 UBQLNLQ8IYU4 475 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TAGAPQ8N103 731 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TMCO6Q96DC7 493 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 HHIPQ96QV1 700 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 PBX4Q9BYU1 374 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 SGK2Q9HBY8 427 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TBC1D14Q9P2M4 693 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 CD84Q9UIB8 345 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 TMEM98Q9Y2Y6 226 aa11.99□□□□□ -0.49
CAPN1-208ENST00000527323 DPM1O60762 260 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 CKMT1AP12532 417 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 CD72P21854 359 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SERPINA4P29622 427 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 PCGF2P35227 344 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 RACK1P63244 317 aaKnown RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 B4GALNT1Q00973 533 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 NAE1Q13564 534 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 DOC2AQ14183 400 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SLX4IPQ5VYV7 408 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SERPINA13PQ6UXR4 307 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 FLCNQ8NFG4 579 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 NFKBIDQ8NI38 313 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 VANGL1Q8TAA9 524 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 FAM129BQ96TA1 746 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SDHCQ99643 169 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 CCDC32Q9BV29 185 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 LINC00597Q9H2U6 94 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 TIGARQ9NQ88 270 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SNTG1Q9NSN8 517 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 CFAP20Q9Y6A4 193 aaKnown RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 GOLGA4Q13439 2230 aaKnown RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 RGS13O14921 159 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 GUCY1B2O75343 617 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 GCM2O75603 506 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 GPX5O75715 221 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 CTSAP10619 480 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 RUNX1T1Q06455 604 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 TEAD2Q15562 447 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 TMPRSS11AQ6ZMR5 421 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF852Q6ZMS4 543 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF783Q6ZMS7 281 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 ASCC1Q8N9N2 400 aaKnown RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 HJURPQ8NCD3 748 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 KLF16Q9BXK1 252 aaPredicted RBP11.98□□□□□ -0.49
CAPN1-208ENST00000527323 RERGLQ9H628 205 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 SMURF1Q9HCE7 757 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
CAPN1-208ENST00000527323 E7EQ34 232 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 NDUFB5O43674 189 aa11.97□□□□□ -0.49
CAPN1-208ENST00000527323 CCNB2O95067 398 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms