RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 FBXO22Q8NEZ5 403 aa13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 KLHL6Q8WZ60 621 aa13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 CIDECQ96AQ7 238 aaPredicted RBP13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 CWH43Q9H720 699 aa13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 NMNAT1Q9HAN9 279 aaPredicted RBP13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 TRPV5Q9NQA5 729 aa13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 CNOT2Q9NZN8 540 aaKnown RBP13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 MAU2Q9Y6X3 613 aa13.18□□□□□ -0.3
PCDHB18P-202ENST00000526308 CHD5Q8TDI0 1954 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 PLXNA3P51805 1871 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 C1orf226A1L170 272 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 SH3D21A4FU49 640 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 DPM1O60762 260 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 IFNW1P05000 195 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 PCSK2P16519 638 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 POLR2EP19388 210 aaKnown RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 IDSP22304 550 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 VEPH1Q14D04 833 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 SYTL3Q4VX76 610 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 GPAT3Q53EU6 434 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 TRIM40Q6P9F5 258 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 TTC23LQ6PF05 361 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 OR4C15Q8NGM1 316 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 FRMD6Q96NE9 622 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 ACER3Q9NUN7 267 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 MALT1Q9UDY8 824 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 TMEM229AB2RXF0 380 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 ARHGEF9O43307 516 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 SCG5P05408 212 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 IGFBP1P08833 259 aaPredicted RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 IL12RB1P42701 662 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 AP1S2P56377 157 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 RPS13P62277 151 aaKnown RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 MC1RQ01726 317 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 DOC2BQ14184 412 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 QPRTQ15274 297 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 CCDC85BQ15834 202 aaPredicted RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 ERAP2Q6P179 960 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 USP30Q70CQ3 517 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 TMEM173Q86WV6 379 aaPredicted RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 SIMC1Q8NDZ2 872 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 GRPEL2Q8TAA5 225 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 JPH3Q8WXH2 748 aaPredicted RBP13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 HHIPQ96QV1 700 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 SEC14L4Q9UDX3 406 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 TRAPPC4Q9Y296 219 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 V9GYH0 126 aa13.17□□□□□ -0.3
PCDHB18P-202ENST00000526308 A0A1W2PQL4 384 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PRAMEF25A6NGN4 478 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ALX3O95076 343 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TUFMP49411 452 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 CYP4F8P98187 520 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ZNF79Q15937 498 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 UAP1L1Q3KQV9 507 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C22orf42Q6IC83 251 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 USP45Q70EL2 814 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TMPRSS11BQ86T26 416 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C11orf74Q86VG3 221 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 DCAF4L2Q8NA75 395 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 HUS1BQ8NHY5 278 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 LINC01599Q8WXQ3 324 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 SLC7A6Q92536 515 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TMEM80Q96HE8 168 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 DHRS1Q96LJ7 313 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C11orf54Q9H0W9 315 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TOR4AQ9NXH8 423 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 DKK3Q9UBP4 350 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 LRFN2Q9ULH4 789 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PCDHB7Q9Y5E2 793 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 DNMT3AQ9Y6K1 912 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PRRC2BQ5JSZ5 2229 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C5orf42Q9H799 3197 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 CSO75390 466 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ATP1B2P14415 290 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TNNI3P19429 210 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PSPHP78330 225 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PAQR6Q6TCH4 344 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PLET1Q6UQ28 207 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PAMR1Q6UXH9 720 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PRR23CQ6ZRP0 262 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TCEANCQ8N8B7 351 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 SOCS4Q8WXH5 440 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PPCDCQ96CD2 204 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 TRMT61AQ96FX7 289 aaKnown RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 NECTIN4Q96NY8 510 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 SRRQ9GZT4 340 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ZDHHC6Q9H6R6 413 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 GPBP1L1Q9HC44 474 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ASAH2Q9NR71 780 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 STUB1Q9UNE7 303 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 CLEC2LP0C7M8 214 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 PBLDP30039 288 aaPredicted RBP13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 HTR2BP41595 481 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 NKX3-2P78367 333 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 C2orf80Q0P641 193 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 ZNF385BQ569K4 471 aa13.16□□□□□ -0.3
PCDHB18P-202ENST00000526308 IER5LQ5T953 404 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms