RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 GRHL2Q6ISB3 625 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 GTF2H2CQ6P1K8 395 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 CLNKQ7Z7G1 428 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 LAS2Q8IYD9 372 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 KIF2BQ8N4N8 673 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 M1APQ8TC57 530 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 HAS2Q92819 552 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 UBE2E3Q969T4 207 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 SERINC2Q96SA4 455 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 CSF3RQ99062 836 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 SORBS1Q9BX66 1292 aaKnown RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 NPLQ9BXD5 320 aaPredicted RBP12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 SLC29A3Q9BZD2 475 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR51B5Q9H339 312 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 IPPKQ9H8X2 491 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 ACTR8Q9H981 624 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 PRTFDC1Q9NRG1 225 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 XPR1Q9UBH6 696 aa12.05□□□□□ -0.48
TRAPPC4-205ENST00000525079 CPAMD8Q8IZJ3 1885 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 A0A088AWK7 358 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 IGKV3D-11A0A0A0MRZ8 115 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TCRBV16S1A1N1A0A5B0 115 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 CCDC189A1A4V9 331 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ABHD2P08910 425 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF10P21506 573 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 CNTFP26441 200 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PPP2R1BP30154 601 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 HPDP32754 393 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ARL1P40616 181 aaPredicted RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TSFMP43897 325 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PIK3CGP48736 1102 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TNFSF10P50591 281 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 LIM2P55344 173 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 SRSF11Q05519 484 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PCDH1Q08174 1060 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TGM3Q08188 693 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 SLC13A2Q13183 592 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 SLC29A2Q14542 456 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PCBP2Q15366 365 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 CPSF6Q16630 551 aaKnown RBP eCLIP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ACER2Q5QJU3 275 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TEX35Q5T0J7 233 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 H3F3CQ6NXT2 135 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF793Q6ZN11 406 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 RPS27LQ71UM5 84 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 CRLF3Q8IUI8 442 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 BEST3Q8N1M1 668 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ARMC2Q8NEN0 867 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PRR7Q8TB68 274 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 GRHL3Q8TE85 626 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ZNF354BQ96LW1 612 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 CDK15Q96Q40 435 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 MTERF1Q99551 399 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 NPAS2Q99743 824 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 MAPKAP1Q9BPZ7 522 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TXLNGYQ9BZA5 131 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 MMP25Q9NPA2 562 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 PNO1Q9NRX1 252 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 ANKRD10Q9NXR5 420 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TEKT2Q9UIF3 430 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 RNF11Q9Y3C5 154 aa12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 TNPO3Q9Y5L0 923 aaKnown RBP12.04□□□□□ -0.48
TRAPPC4-205ENST00000525079 SAGE2PA6NJ88 616 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 TGFBR3LH3BV60 316 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CYR61O00622 381 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 E2F3O00716 465 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CLDN4O14493 209 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 OR7A17O14581 309 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 SMIM24O75264 130 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CBX6O95503 412 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 MYBL2P10244 700 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 COL6A2P12110 1019 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 ATP5A1P25705 553 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 NEK2P51955 445 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 RPS13P62277 151 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 TSNAXIP1Q2TAA8 658 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 AP5B1Q2VPB7 878 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 LGSNQ5TDP6 509 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 KHDRBS2Q5VWX1 349 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 LIPJQ5W064 366 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 ADGRD1Q6QNK2 874 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CHSY3Q70JA7 882 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 SCUBE1Q8IWY4 988 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 FAM26EQ8N5C1 309 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 ACOT4Q8N9L9 421 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 NFAM1Q8NET5 270 aaPredicted RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 HUS1BQ8NHY5 278 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 ATP6V1E2Q96A05 226 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 MTFMTQ96DP5 389 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CMTM7Q96FZ5 175 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 NSUN5Q96P11 429 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 KCNC2Q96PR1 638 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 TBCDQ9BTW9 1192 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 EPB41L4BQ9H329 900 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 CDCP1Q9H5V8 836 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 NOL11Q9H8H0 719 aaKnown RBP12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 AGPAT4Q9NRZ5 378 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 KCMF1Q9P0J7 381 aa12.03□□□□□ -0.48
TRAPPC4-205ENST00000525079 FBXW2Q9UKT8 454 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms