RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	KIAA0895	Q8NCT3	520 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	BEST2	Q8NFU1	509 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	OR2AJ1	Q8NGZ0	328 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	EXD1	Q8NHP7	514 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	DQX1	Q8TE96	717 aa	Known RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	UBLCP1	Q8WVY7	318 aa	Predicted RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ATL1	Q8WXF7	558 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	SNAPC3	Q92966	411 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	WBP2	Q969T9	261 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ORAI1	Q96D31	301 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ERLEC1	Q96DZ1	483 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	PHF21B	Q96EK2	531 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	CDKN2AIPNL	Q96HQ2	116 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF583	Q96ND8	569 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	USP28	Q96RU2	1077 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ZNF607	Q96SK3	696 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	SEPHS2	Q99611	448 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	FAM213A	Q9BRX8	229 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ATG101	Q9BSB4	218 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TBC1D10A	Q9BXI6	508 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	TSPYL1	Q9H0U9	437 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	HIPK3	Q9H422	1215 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ACTR8	Q9H981	624 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ROPN1	Q9HAT0	212 aa	Predicted RBP	4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	HPS4	Q9NQG7	708 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	IL20RA	Q9UHF4	553 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	ERVK-11	Q9UQG0	969 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	NOTCH2	Q04721	2471 aa		4.03	□□□□□ -1.76
PCM1-223	ENST00000524356	BRWD1	Q9NSI6	2320 aa		4.03	□□□□□ -1.77
PCM1-223	ENST00000524356	WDFY4	Q6ZS81	3184 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	EVPL	Q92817	2033 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	FANCI	Q9NVI1	1328 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MAPK8IP3	Q9UPT6	1336 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	DDX60L	Q5H9U9	1706 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356		A0A0U1RRA0	63 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	SERTM2	A0A1B0GWG4	89 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	GSAP	A4D1B5	854 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF716	A6NP11	495 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	FLRT2	O43155	660 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	OR10H2	O60403	315 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PRAF2	O60831	178 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MTRF1	O75570	445 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CNMD	O75829	334 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CIB2	O75838	187 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	IGHE	P01854	428 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	UQCRFS1P1	P0C7P4	283 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF735	P0CB33	412 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	DLAT	P10515	647 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ANXA8	P13928	327 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MYOG	P15173	224 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CAPN2	P17655	700 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	UBA1	P22314	1058 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	HSD17B2	P37059	387 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	IER3	P46695	156 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ASCL1	P50553	236 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MFAP3	P55082	362 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MTCP1	P56278	107 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CDK3	Q00526	305 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ARHGAP1	Q07960	439 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	LCP2	Q13094	533 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PKP1	Q13835	747 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	SQLE	Q14534	574 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MELK	Q14680	651 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	STXBP2	Q15833	593 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	TMEM41B	Q5BJD5	291 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	FBXO48	Q5FWF7	155 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	KIAA1755	Q5JYT7	1200 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CCDC122	Q5T0U0	273 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	LCE3C	Q5T5A8	94 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ANXA8L1	Q5VT79	327 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ARHGEF16	Q5VV41	709 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ALS2CL	Q60I27	953 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	NSUN5P2	Q63ZY6	315 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PLEKHA7	Q6IQ23	1121 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PRR27	Q6MZM9	219 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PMF1	Q6P1K2	205 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	BTNL8	Q6UX41	500 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	B3GLCT	Q6Y288	498 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	B3GNT6	Q6ZMB0	384 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	LINGO2	Q7L985	606 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	LRRC70	Q7Z2Q7	622 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ATG9A	Q7Z3C6	839 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	NRARP	Q7Z6K4	114 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	RBM23	Q86U06	439 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ZC3HC1	Q86WB0	502 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	CCDC25	Q86WR0	208 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PSTK	Q8IV42	348 aa	Known RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	DENND6A	Q8IWF6	608 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	SFTPA1	Q8IWL2	248 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	PHC2	Q8IXK0	858 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	ZNF321P	Q8N8H1	164 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	GBP7	Q8N8V2	638 aa	Predicted RBP	4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	OR1J2	Q8NGS2	313 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	OR10T2	Q8NGX3	314 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	SUN5	Q8TC36	379 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	HM13	Q8TCT9	377 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	NEUROG1	Q92886	237 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MOB3A	Q96BX8	217 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	LINGO1	Q96FE5	620 aa		4.02	□□□□□ -1.77
PCM1-223	ENST00000524356	MED30	Q96HR3	178 aa		4.02	□□□□□ -1.77

Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms