RNA–Protein interactions for RNA: ENST00000524162.5

TRAPPC9-215, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-215ENST00000524162 B3GALT4O96024 378 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 RPS17P08708 135 aaKnown RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 EEF1DP29692 281 aaKnown RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 OLR1P78380 273 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 CUL3Q13618 768 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 RUNX2Q13950 521 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 KHDRBS2Q5VWX1 349 aaKnown RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 B3GNTL1Q67FW5 361 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 ADNP2Q6IQ32 1131 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 WDR93Q6P2C0 686 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 GSPT2Q8IYD1 628 aaKnown RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 SHISA5Q8N114 240 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 MYRIPQ8NFW9 859 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 HUS1BQ8NHY5 278 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 MIB2Q96AX9 1013 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 PTCHD1Q96NR3 888 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 F2RL3Q96RI0 385 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 COPS7BQ9H9Q2 264 aaPredicted RBP19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 SLAMF7Q9NQ25 335 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 DCDC2Q9UHG0 476 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 TEKT2Q9UIF3 430 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 POLEQ07864 2286 aa19.63■□□□□ 0.73
TRAPPC9-215ENST00000524162 SLU7O95391 586 aaKnown RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 TAC1P20366 129 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 PTX3P26022 381 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 PLA2G16P53816 162 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 SFT2D3Q587I9 215 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 UBE3DQ7Z6J8 389 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 SCUBE1Q8IWY4 988 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 LGI4Q8N135 537 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 WDR20Q8TBZ3 569 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 BRIX1Q8TDN6 353 aaKnown RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 UBLCP1Q8WVY7 318 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 HAS2Q92819 552 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 PHF21BQ96EK2 531 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 ZBTB20Q9HC78 741 aaPredicted RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 DMRT3Q9NQL9 472 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 KCMF1Q9P0J7 381 aa19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 PPIEQ9UNP9 301 aaKnown RBP19.62■□□□□ 0.73
TRAPPC9-215ENST00000524162 LRRC14BA6NHZ5 514 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 TTLL8A6PVC2 850 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 A8MT66 165 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 CYR61O00622 381 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 OR7A17O14581 309 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 B4GALT2O60909 372 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 CDH16O75309 829 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 CDC123O75794 336 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 SEC24DO94855 1032 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 HIST1H1TP22492 207 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 ATP5A1P25705 553 aaKnown RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 CCNG1P51959 295 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 LIM2P55344 173 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 OR4D2P58180 307 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 NAA20P61599 178 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 HERVK_113P63132 956 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 TLR1Q15399 786 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 PLEKHN1Q494U1 663 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 PAPD4Q6PIY7 484 aaKnown RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 SH2D5Q6ZV89 423 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 SLC22A9Q8IVM8 553 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 IQCKQ8N0W5 287 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 ACOT4Q8N9L9 421 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 ZNF483Q8TF39 744 aaPredicted RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 TSLPQ969D9 159 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 RGMAQ96B86 450 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 ERVK-6Q9BXR3 956 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 NOL11Q9H8H0 719 aaKnown RBP19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 ZBTB26Q9HCK0 441 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 MS4A12Q9NXJ0 267 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 TMEM216Q9P0N5 145 aa19.61■□□□□ 0.73
TRAPPC9-215ENST00000524162 FLNBO75369 2602 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 OR2W5A6NFC9 320 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 ESPNB1AK53 854 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 SEMA3DO95025 777 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 OTCP00480 354 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 NUDT17P0C025 328 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 ITGAMP11215 1152 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 PCNAP12004 261 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 KCNC4Q03721 635 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 ACTN3Q08043 901 aaPredicted RBP19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 TRAF3Q13114 568 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 AP5B1Q2VPB7 878 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 BTBD16Q32M84 506 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 RPUSD3Q6P087 351 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 EMBQ6PCB8 327 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 ARMC10Q8N2F6 343 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 ZCCHC7Q8N3Z6 543 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 CPT1CQ8TCG5 803 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 CCDC126Q96EE4 140 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 BARD1Q99728 777 aaKnown RBP19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 RBCK1Q9BYM8 510 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 RNF11Q9Y3C5 154 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 CLDN16Q9Y5I7 305 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 SPACA6W5XKT8 324 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 SVILO95425 2214 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 RELNP78509 3460 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 HIVEP3Q5T1R4 2406 aa19.6■□□□□ 0.73
TRAPPC9-215ENST00000524162 DYTNA2CJ06 578 aa19.59■□□□□ 0.73
TRAPPC9-215ENST00000524162 CTNSO60931 367 aa19.59■□□□□ 0.73
TRAPPC9-215ENST00000524162 TGFB1P01137 390 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms