RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 GDF10P55107 478 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 CUL1Q13616 776 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 BMPR2Q13873 1038 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 SF3B4Q15427 424 aaKnown RBP eCLIP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 SPA17Q15506 151 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 TERF2Q15554 542 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ZNF750Q32MQ0 723 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 AADACL2Q6P093 401 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 CLEC17AQ6ZS10 378 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 UBE2R2Q712K3 238 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 YTHDF3Q7Z739 585 aaKnown RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 KRTAP1-3Q8IUG1 177 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 LRRC75A-AS1Q8N1F1 130 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 CIARTQ8N365 385 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 MFSD9Q8NBP5 474 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 APCDD1LQ8NCL9 501 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ZNF740Q8NDX6 193 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 NFAM1Q8NET5 270 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 SREK1Q8WXA9 508 aaKnown RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 HSPBAP1Q96EW2 488 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 PDLIM2Q96JY6 352 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 CAPZA3Q96KX2 299 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 BIRC8Q96P09 236 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 LIN28AQ9H9Z2 209 aaKnown RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ETNK1Q9HBU6 452 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ZFATQ9P243 1243 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ZNF629Q9UEG4 869 aaPredicted RBP8.63□□□□□ -1.03
PTPN12-216ENST00000523952 TRPS1Q9UHF7 1281 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 ZNF148Q9UQR1 794 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 CR1P17927 2039 aa8.63□□□□□ -1.03
PTPN12-216ENST00000523952 SONP18583 2426 aaKnown RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 GOLGA8KD6RF30 607 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 GOLGA8TH3BQL2 631 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CBFA2T2O43439 604 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 LCMT2O60294 686 aaKnown RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 GLSO94925 669 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 VAPBO95292 243 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 B3GALT4O96024 378 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 IFNA2P01563 188 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 IFNA16P05015 189 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CELA3AP09093 270 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 MPC1LP0DKB6 136 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CDH1P12830 882 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CCND1P24385 295 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 HNF4AP41235 474 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 GRIA1P42261 906 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CPA2P48052 419 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 DNASE1L1P49184 302 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CCR8P51685 355 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CRADDP78560 199 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 SORDQ00796 357 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 SLC13A2Q13183 592 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 PWP1Q13610 501 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 GBX1Q14549 363 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 RPS6KA1Q15418 735 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 SIX1Q15475 284 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 FBXL19-AS1Q494R0 122 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 HMBOX1Q6NT76 420 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 HSDL2Q6YN16 418 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 ULK2Q8IYT8 1036 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 PRELID2Q8N945 189 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 TNIP2Q8NFZ5 429 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 LPGAT1Q92604 370 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 FAR2Q96K12 515 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 RASL10BQ96S79 203 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 TCF12Q99081 682 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 NECTIN3Q9NQS3 549 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 RAB6BQ9NRW1 208 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 TUBA8Q9NY65 449 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 BFARQ9NZS9 450 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 MYOTQ9UBF9 498 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 ADAM21Q9UKJ8 722 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 BOKQ9UMX3 212 aaPredicted RBP8.62□□□□□ -1.03
PTPN12-216ENST00000523952 MMACHCQ9Y4U1 282 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 CLCA3PQ9Y6N3 262 aa8.62□□□□□ -1.03
PTPN12-216ENST00000523952 RAI1Q7Z5J4 1906 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 C15orf38-AP3S2A0A0A6YYH1 394 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CTAGE9A4FU28 777 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 AP3B1O00203 1094 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CLDN4O14493 209 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 MFAP3LO75121 409 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 ENO3P13929 434 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 PAMP19021 973 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 NMBRP28336 390 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 STIP1P31948 543 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 RAB8AP61006 207 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 KCNJ2P63252 427 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 KIAA0930Q6ICG6 404 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CAVIN1Q6NZI2 390 aaKnown RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 PODNL1Q6PEZ8 512 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 OPN5Q6U736 354 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CXorf67Q86X51 503 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 LACC1Q8IV20 430 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 LRRC56Q8IYG6 542 aaPredicted RBP8.61□□□□□ -1.03
PTPN12-216ENST00000523952 TMEM132CQ8N3T6 1108 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 AFAP1L2Q8N4X5 818 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 UBL4BQ8N7F7 174 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 GPATCH11Q8N954 259 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 CCDC89Q8N998 374 aa8.61□□□□□ -1.03
PTPN12-216ENST00000523952 GOLM1Q8NBJ4 401 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms