RNA–Protein interactions for RNA: ENST00000523685.5

CTNNA1-239, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-239ENST00000523685 PTERQ96BW5 349 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 ULK4Q96C45 1275 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 LINC00615Q96LM1 132 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 FCRL5Q96RD9 977 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 COPS8Q99627 209 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 WDR77Q9BQA1 342 aaPredicted RBP5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 C17orf62Q9BQA9 187 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 HEMGNQ9BXL5 484 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 AP1M1Q9BXS5 423 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 PITPNM3Q9BZ71 974 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 OR52A5Q9H2C5 316 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 TFB2MQ9H5Q4 396 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 MVB12BQ9H7P6 319 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 COG4Q9H9E3 785 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 SERHLQ9NQF3 203 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 SMOXQ9NWM0 555 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 IFNKQ9P0W0 207 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 DKK2Q9UBU2 259 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 CIDEBQ9UHD4 219 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 CDC23Q9UJX2 597 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 FBXL4Q9UKA2 621 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 NENFQ9UMX5 172 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 ASF1AQ9Y294 204 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 KLHL20Q9Y2M5 609 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 AP1M2Q9Y6Q5 423 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 PCSK5Q92824 1860 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 SPTBP11277 2137 aa5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 PRRC2CQ9Y520 2896 aaKnown RBP5.02□□□□□ -1.61
CTNNA1-239ENST00000523685 ABCA12Q86UK0 2595 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 CSMD1Q96PZ7 3565 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 A0A0J9YY10 115 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 C5orf60A6NFR6 353 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 F5H697 171 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 GOLGA6L19H0YKK7 550 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 AGPSO00116 658 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ANXA9O76027 345 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZFPL1O95159 310 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 MT-ND5P03915 603 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 UMODP07911 640 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 UQCRHP07919 91 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 CHRM5P08912 532 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 TNFSF4P23510 183 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZFP36P26651 326 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 PSMB4P28070 264 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 RBL1P28749 1068 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 PTGS2P35354 604 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ARHGAP25P42331 645 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 GEMP55040 296 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 CSE1LP55060 971 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 KCNK10P57789 538 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 XIAPP98170 497 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 AIMP2Q13155 320 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 PRPSAP1Q14558 356 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 HLXQ14774 488 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZNF169Q14929 603 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZRSR2Q15696 482 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 RBBP7Q16576 425 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 CD300EQ496F6 205 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SYTL3Q4VX76 610 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 FAM209BQ5JX69 171 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 LRRC38Q5VT99 294 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 AGAP7PQ5VUJ5 663 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ITPRIPL1Q6GPH6 555 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 RHBDD2Q6NTF9 364 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SNX20Q7Z614 316 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SERPINA9Q86WD7 417 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 GAS2L3Q86XJ1 694 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 VSIG1Q86XK7 387 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 LIX1LQ8IVB5 337 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 PRSS58Q8IYP2 241 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SLC34A3Q8N130 599 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 CLDN19Q8N6F1 224 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 LMNTD1Q8N9Z9 388 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 PROKR1Q8TCW9 393 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 FAR1Q8WVX9 515 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZDHHC19Q8WVZ1 309 aaPredicted RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SPSB4Q96A44 273 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 IQCDQ96DY2 449 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZNF503Q96F45 646 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 THOC3Q96J01 351 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 DNAJC1Q96KC8 554 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SNX22Q96L94 193 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SGCZQ96LD1 299 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 AGAP4Q96P64 663 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 QKIQ96PU8 341 aaKnown RBP eCLIP5.01□□□□□ -1.619e-7■■■■■ 26.9
CTNNA1-239ENST00000523685 VAT1Q99536 393 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 FAM118BQ9BPY3 351 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 MESP1Q9BRJ9 268 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 GBA3Q9H227 469 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 GOLPH3Q9H4A6 298 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 EPS8L2Q9H6S3 715 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 VPS37BQ9H9H4 285 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ZNHIT6Q9NWK9 470 aaKnown RBP5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SPHK1Q9NYA1 384 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SMARCAL1Q9NZC9 954 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 SH3BGRL2Q9UJC5 107 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ITGB1BP2Q9UKP3 347 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ICKQ9UPZ9 632 aa5.01□□□□□ -1.61
CTNNA1-239ENST00000523685 ENTPD4Q9Y227 616 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms