RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 PLA2G12AQ9BZM1 189 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 FAM129AQ9BZQ8 928 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 ANO10Q9NW15 660 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SH2B3Q9UQQ2 575 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 SVEP1Q4LDE5 3571 aa12.75□□□□□ -0.37
NKX3-1-202ENST00000523261 C15orf38-AP3S2A0A0A6YYH1 394 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 LRRC3CA6NJW4 275 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF354AO60765 605 aaPredicted RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ERN1O75460 977 aaKnown RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 METTL18O95568 372 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 RPS3P23396 243 aaKnown RBP eCLIP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PPP2R1BP30154 601 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 CPA2P48052 419 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 HK2P52789 917 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ATP5J2P56134 94 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 EIF3EP60228 445 aaKnown RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 SKP1P63208 163 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PRAMEP78395 509 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 SLC18A3Q16572 532 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PARP6Q2NL67 630 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ACSBG2Q5FVE4 666 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 RNF187Q5TA31 235 aaPredicted RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 DARS2Q6PI48 645 aaKnown RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ADGRD1Q6QNK2 874 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PLEKHM3Q6ZWE6 761 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 KATNAL2Q8IYT4 538 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 TIMP4Q99727 224 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 FAM118BQ9BPY3 351 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PIGQQ9BRB3 760 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PRDM14Q9GZV8 571 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 PNO1Q9NRX1 252 aaKnown RBP12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 CATSPERZQ9NTU4 200 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 QPCTLQ9NXS2 382 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 ANAPC5Q9UJX4 755 aa12.74□□□□□ -0.37
NKX3-1-202ENST00000523261 RNH1P13489 461 aaKnown RBP12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 LOXP28300 417 aaPredicted RBP12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 MC3RP41968 323 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 MARCKSL1P49006 195 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 ZBED6P86452 979 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 SRSF2Q01130 221 aaKnown RBP12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 FOXF2Q12947 444 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 DUSP8Q13202 625 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 VEZF1Q14119 521 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 KCNJ11Q14654 390 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 RPS6KA1Q15418 735 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 CLEC12BQ2HXU8 276 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 KLHL38Q2WGJ6 581 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 CCDC181Q5TID7 509 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 LRRC6Q86X45 466 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 RCOR2Q8IZ40 523 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 RASGEF1CQ8N431 466 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 C9orf106Q8NAJ2 232 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 MFSD9Q8NBP5 474 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 OR52K1Q8NGK4 314 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 TMEM171Q8WVE6 324 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 ROBO4Q8WZ75 1007 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 FAM136AQ96C01 138 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 WFIKKN1Q96NZ8 548 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 TRIB1Q96RU8 372 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 ZFP64Q9NPA5 681 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 CDC42EP3Q9UKI2 254 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 CLDN16Q9Y5I7 305 aa12.73□□□□□ -0.37
NKX3-1-202ENST00000523261 MACROD2A1Z1Q3 448 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 TGFBR3LH3BV60 316 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 PSMD12O00232 456 aaPredicted RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 CD3EAPO15446 510 aaKnown RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 NDUFS4O43181 175 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 CEP104O60308 925 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 NIPSNAP2O75323 286 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 TMIGD3P0DMS9 266 aaPredicted RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 CRYGSP22914 178 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 IMPA1P29218 277 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 EIF3BP55884 814 aaKnown RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 NR1I3Q14994 352 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 SF3B4Q15427 424 aaKnown RBP eCLIP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 STX1AQ16623 288 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 NIPAL1Q6NVV3 410 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 OPN5Q6U736 354 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 HSDL2Q6YN16 418 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 PM20D2Q8IYS1 436 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 ZBED6CLQ96FA7 236 aaPredicted RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 MARK4Q96L34 752 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 BIRC8Q96P09 236 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 SLC30A3Q99726 388 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 RHBGQ9H310 441 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 CALHM2Q9HA72 323 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 CLK4Q9HAZ1 481 aaKnown RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 SH2D2AQ9NP31 389 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 KLHL28Q9NXS3 571 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 GALPQ9UBC7 116 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 BOKQ9UMX3 212 aaPredicted RBP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 MMACHCQ9Y4U1 282 aa12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.72□□□□□ -0.37
NKX3-1-202ENST00000523261 SYF2O95926 243 aaKnown RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 ZNF888P0CJ79 500 aaPredicted RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 ADRA1DP25100 572 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 THBS2P35442 1172 aa12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 SKIV2L2P42285 1042 aaKnown RBP12.71□□□□□ -0.37
NKX3-1-202ENST00000523261 TBPL1P62380 186 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms