RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 PGBD2Q6P3X8 592 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TSPEARQ8WU66 669 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 PYURFQ96I23 114 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 SP140LQ9H930 580 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 TRIM36Q9NQ86 728 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 PTTG2Q9NZH5 202 aa15.65■□□□□ 0.1
PCDHA3-201ENST00000522353 CSTAP01040 98 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 TIA1P31483 386 aaKnown RBP eCLIP15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 SLC15A1P46059 708 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 MVKQ03426 396 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 TIGD6Q17RP2 521 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 KLHDC10Q6PID8 442 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 C15orf39Q6ZRI6 1047 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 ALPK1Q96QP1 1244 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 LPAR4Q99677 370 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 TSSK6Q9BXA6 273 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 ACTR3BQ9P1U1 418 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 PFDN2Q9UHV9 154 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 MEIS3P2A8K0S8 358 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 K7ERQ8 282 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 AK1P00568 194 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 CD9P21926 228 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 RPS3AP61247 264 aaKnown RBP15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 IDNKQ5T6J7 187 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 EPGNQ6UW88 154 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 OR4K1Q8NGD4 311 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 ZDHHC1Q8WTX9 485 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 NPLQ9BXD5 320 aaPredicted RBP15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 TMEM184CQ9NVA4 438 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 EMC8O43402 210 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 GABRA3P34903 492 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 CAPZA1P52907 286 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 THEM6Q8WUY1 208 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 FZD3Q9NPG1 666 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 PCDHB14Q9Y5E9 798 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 A0A1B0GVI7 797 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 NPIPA2E9PIF3 369 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 NPIPA3F8WFD2 350 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 RNF13O43567 381 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 CCNOP22674 350 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 ECHS1P30084 290 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 SLAMF1Q13291 335 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 HSH2DQ96JZ2 352 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 SNTG1Q9NSN8 517 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 TMLHEQ9NVH6 421 aa15.64■□□□□ 0.09
PCDHA3-201ENST00000522353 METTL21EPA6NDL7 271 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 RPA4Q13156 261 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 PMS2P3Q13401 168 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ZMYND11Q15326 602 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF648Q5T619 568 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 TTLL10Q6ZVT0 673 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 LRRC25Q8N386 305 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ORAI3Q9BRQ5 295 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 EPHA6Q9UF33 1036 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 PRAMEF26H0Y7S4 382 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 EIF3FO00303 357 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 AXIN1O15169 862 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 DRD2P14416 443 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 XRCC1P18887 633 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 AOC1P19801 751 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ATP4BP51164 291 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ZNF84P51523 738 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 HSDL2Q6YN16 418 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ACOT12Q8WYK0 555 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 OSTF1Q92882 214 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 MS4A4AQ96JQ5 239 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ZFP3Q96NJ6 502 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 GFM1Q96RP9 751 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 OAZ3Q9UMX2 235 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 MEMO1Q9Y316 297 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ACOT7O00154 380 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 SLC22A1O15245 554 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 RPP14O95059 124 aaKnown RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 CHRM5P08912 532 aaPredicted RBP15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 SRCP12931 536 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 FOXK1P85037 733 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 FADDQ13158 208 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 GBX1Q14549 363 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 UNQ6126/PRO20091Q6UXV3 157 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 TMPPEQ6ZT21 453 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 LINGO2Q7L985 606 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 GPAT4Q86UL3 456 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 C1orf21Q9H246 121 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 EBF2Q9HAK2 575 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 ZBTB26Q9HCK0 441 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 PGAM2P15259 253 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 HK1P19367 917 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 TNFRSF4P43489 277 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 CDH11P55287 796 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 C6orf136Q5SQH8 315 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 WDTC1Q8N5D0 677 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 AQP11Q8NBQ7 271 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 KCTD7Q96MP8 289 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 AMBNQ9NP70 447 aa15.63■□□□□ 0.09
PCDHA3-201ENST00000522353 DPPA5A6NC42 116 aa15.62■□□□□ 0.09
PCDHA3-201ENST00000522353 CHP2O43745 196 aa15.62■□□□□ 0.09
PCDHA3-201ENST00000522353 BCAS2O75934 225 aaPredicted RBP15.62■□□□□ 0.09
PCDHA3-201ENST00000522353 PROS1P07225 676 aa15.62■□□□□ 0.09
PCDHA3-201ENST00000522353 CD1DP15813 335 aa15.62■□□□□ 0.09
PCDHA3-201ENST00000522353 CKMT2P17540 419 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms