RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 WFDC5Q8TCV5 224 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 UCMAQ8WVF2 138 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KRT35Q92764 455 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ARHGEF2Q92974 986 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CLDN23Q96B33 292 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 FAF2Q96CS3 445 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 KLHL29Q96CT2 875 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ELP4Q96EB1 424 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ALG14Q96F25 216 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM19Q96HH6 336 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 C7orf26Q96N11 449 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CSPG4P5Q96PW8 444 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 RNF157Q96PX1 679 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ALS2CR12Q96Q35 445 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF670Q9BS34 389 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 FEM1AQ9BSK4 669 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 H2AFJQ9BTM1 129 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 CALN1Q9BXU9 219 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 MAK16Q9BXY0 300 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 GOLPH3Q9H4A6 298 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TBC1D17Q9HA65 648 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 LMAN1LQ9HAT1 526 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 PCDH9Q9HC56 1237 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 LTB4R2Q9NPC1 389 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 SNTG1Q9NSN8 517 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ABCB8Q9NUT2 735 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 ELOVL2Q9NXB9 296 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 AASSQ9UDR5 926 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 INTS6Q9UL03 887 aaKnown RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 MTF2Q9Y483 593 aaPredicted RBP3.1□□□□□ -1.91
VPS13B-209ENST00000521559 JRKLQ9Y4A0 524 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TRIP11Q15643 1979 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DNAH12Q6ZR08 3092 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 DOCK7Q96N67 2140 aa3.1□□□□□ -1.91
VPS13B-209ENST00000521559 TNRC18O15417 2968 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PLXNA3P51805 1871 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NLRC5Q86WI3 1866 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 hCG_1818297A0A087WSY0 165 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 A0A0D9SEW6 157 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CXorf51AA0A1B0GTR3 108 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 A0A1W2PPH5 198 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ARHGAP42A6NI28 874 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 KDELR3O43731 214 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 FGF17O60258 216 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SNAP91O60641 907 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CST8O60676 142 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NDUFS7O75251 213 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ZMPSTE24O75844 475 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PDGFBP01127 241 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CRYAAP02489 173 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ATP5BP06576 529 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SRPRAP08240 638 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MMP2P08253 660 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CD48P09326 243 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 KRT10P13645 584 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ETFAP13804 333 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 POLR2EP19388 210 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ITGAXP20702 1163 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CAPN3P20807 821 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MSNP26038 577 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NNMTP40261 264 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MAGEA9P43362 315 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 RPS9P46781 194 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MARCKSL1P49006 195 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CLDN2P57739 230 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 GNG11P61952 73 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 KDSRQ06136 332 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ARL16Q0P5N6 197 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ZBTB17Q13105 803 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PAFAH1B3Q15102 231 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PARP15Q460N3 678 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TFDP3Q5H9I0 405 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 EOGTQ5NDL2 527 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 IRAK1BP1Q5VVH5 260 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TMEM215Q68D42 235 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TMCO3Q6UWJ1 677 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MFSD7Q6UXD7 560 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 BZW1Q7L1Q6 419 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF771Q7L3S4 317 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 LRRC49Q8IUZ0 686 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ARHGAP12Q8IWW6 846 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SLC35F6Q8N357 371 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ZCCHC9Q8N567 271 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 NPWQ8N729 165 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PLD5Q8N7P1 536 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 DCAF4L2Q8NA75 395 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 ERGIC1Q969X5 290 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TRIM44Q96DX7 344 aaPredicted RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 RBM41Q96IZ5 413 aaKnown RBP3.09□□□□□ -1.91
VPS13B-209ENST00000521559 TSGA13Q96PP4 275 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 DUX3Q96PT4 197 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 BBS4Q96RK4 519 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 CSF3RQ99062 836 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 PSMB7Q99436 277 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 OSBPL8Q9BZF1 889 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 SLC39A8Q9C0K1 460 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MMP28Q9H239 520 aa3.09□□□□□ -1.91
VPS13B-209ENST00000521559 MFSD1Q9H3U5 465 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms