RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 OR2L5Q8NG80 312 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 FBXO25Q8TCJ0 367 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 ADAMTS18Q8TE60 1221 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 CCDC120Q96HB5 630 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 SERINC2Q96SA4 455 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 EFCAB11Q9BUY7 163 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 ERVK-11Q9UQG0 969 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 SPACA6W5XKT8 324 aa15.1■□□□□ 0.01
IGHV3-42-201ENST00000520410 LRIT2A6NDA9 550 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 TFECO14948 347 aaPredicted RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 CDC40O60508 579 aaKnown RBP eCLIP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 SMIM10L1P0DMW3 83 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 PPP2R1BP30154 601 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 ARL1P40616 181 aaPredicted RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 CA7P43166 264 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 MTTPP55157 894 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 CKAP4Q07065 602 aaKnown RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 STX4Q12846 297 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 ZNF468Q5VIY5 522 aaPredicted RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 LRRC70Q7Z2Q7 622 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 MRGPRGQ86SM5 289 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 LGI4Q8N135 537 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 CYP4Z2PQ8N1L4 340 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 CPSF7Q8N684 471 aaKnown RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 STAG3L4Q8TBR4 150 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 NCLNQ969V3 563 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 RELTQ969Z4 430 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 MARVELD3Q96A59 401 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 KIAA1191Q96A73 305 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 VMP1Q96GC9 406 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 SCMH1Q96GD3 660 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 SMIM10Q96HG1 83 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 GPR137Q96N19 417 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 F2RL3Q96RI0 385 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 NPLQ9BXD5 320 aaPredicted RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 AICDAQ9GZX7 198 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 NMRAL1Q9HBL8 299 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 NUDT4Q9NZJ9 180 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 OPTCQ9UBM4 332 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 TINAGQ9UJW2 476 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 USP9XQ93008 2570 aaPredicted RBP15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 ICE1Q9Y2F5 2266 aa15.09■□□□□ 0.01
IGHV3-42-201ENST00000520410 ESYT3A0FGR9 886 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 UBXN8O00124 270 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 SAP18O00422 153 aaKnown RBP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 NEURL1O76050 574 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 SNRPB2P08579 225 aaKnown RBP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 LTA4HP09960 611 aaKnown RBP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 RFC3P40938 356 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 SSR2P43308 183 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 RAP1GDS1P52306 607 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 HSD17B7P56937 341 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 MLF1P58340 268 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 HSF1Q00613 529 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 SLC7A5Q01650 507 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 C3AR1Q16581 482 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 PDPRQ8NCN5 879 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 FRMD6Q96NE9 622 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 CSF3RQ99062 836 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 MCMBPQ9BTE3 642 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 CD244Q9BZW8 370 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 PITHD1Q9GZP4 211 aaPredicted RBP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 NT5DC2Q9H857 520 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 KLF13Q9Y2Y9 288 aaPredicted RBP15.08■□□□□ 0
IGHV3-42-201ENST00000520410 PCDHGB6Q9Y5F9 930 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 CLCA3PQ9Y6N3 262 aa15.08■□□□□ 0
IGHV3-42-201ENST00000520410 RP1L1Q8IWN7 2480 aaPredicted RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 IGKV3D-11A0A0A0MRZ8 115 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 ZNHIT1O43257 154 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 HNRNPRO43390 633 aaKnown RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 NME2P1O60361 137 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 ITGA10O75578 1167 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 GFAPP14136 432 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 NME2P22392 152 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 CRABP2P29373 138 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 KCNC1P48547 511 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 MEOX1P50221 254 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 HLCSP50747 726 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 HNRNPFP52597 415 aaKnown RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 LIM2P55344 173 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 GPR85P60893 370 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 ETF1P62495 437 aaKnown RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 TRADDQ15628 312 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 KRTCAP3Q53RY4 240 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 SP5Q6BEB4 398 aaPredicted RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 MED27Q6P2C8 311 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 SRRM1Q8IYB3 904 aaKnown RBP15.07■□□□□ 0
IGHV3-42-201ENST00000520410 ZNF595Q8IYB9 648 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 GHDCQ8N2G8 530 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 TMEM52Q8NDY8 209 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 KCTD4Q8WVF5 259 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 UBE2E3Q969T4 207 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 SEC16BQ96JE7 1060 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 KCNC2Q96PR1 638 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 PHACTR1Q9C0D0 580 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 ROGDIQ9GZN7 287 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 EHD1Q9H4M9 534 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 RUBCNLQ9H714 662 aa15.07■□□□□ 0
IGHV3-42-201ENST00000520410 LIN28AQ9H9Z2 209 aaKnown RBP15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms