RNA–Protein interactions for RNA: ENST00000520339.5

CTNNA1-221, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-221ENST00000520339 SSBP4Q9BWG4 385 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 FAM129AQ9BZQ8 928 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 ANKHQ9HCJ1 492 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 HCN3Q9P1Z3 774 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 C19orf25Q9UFG5 118 aaPredicted RBP8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 SNX12Q9UMY4 172 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 VWA7Q9Y334 891 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 SLC22A7Q9Y694 548 aa8.73□□□□□ -1.01
CTNNA1-221ENST00000520339 A8MUI8 341 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 CTIFO43310 598 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 ZG16O60844 167 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 DNAJB6O75190 326 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 RDH16O75452 317 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 WISP2O76076 250 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 RASAL1O95294 804 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 HIST1H2AGP0C0S8 130 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 HIST1H2ADP20671 130 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 IL10P22301 178 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 GRK3P35626 688 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 AGTR2P50052 363 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 CCR8P51685 355 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 PGGT1BP53609 377 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 IL2P60568 153 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 PPP2R2AP63151 447 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 RHAGQ02094 409 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 SFRP5Q5T4F7 317 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 HECTD2Q5U5R9 776 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 C1QL3Q5VWW1 255 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 FOXB2Q5VYV0 432 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 DUPD1Q68J44 220 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 CAPN13Q6MZZ7 669 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 GFRALQ6UXV0 394 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 STRA8Q7Z7C7 330 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 ZNF227Q86WZ6 799 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 TICAM1Q8IUC6 712 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 SLC34A3Q8N130 599 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 GABPB2Q8TAK5 448 aaPredicted RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 ZCCHC10Q8TBK6 192 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 M1APQ8TC57 530 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 FBXL8Q96CD0 374 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 MOCOSQ96EN8 888 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 CERS2Q96G23 380 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 SNF8Q96H20 258 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 PDLIM5Q96HC4 596 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 HIST1H2AHQ96KK5 128 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 ZNF354BQ96LW1 612 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 OR4K3Q96R72 315 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 HIST1H2AJQ99878 128 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 WDR83Q9BRX9 315 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 H2AFJQ9BTM1 129 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 PRDM14Q9GZV8 571 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 DDX47Q9H0S4 455 aaKnown RBP8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 LANCL2Q9NS86 450 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 SLC17A6Q9P2U8 582 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 ASIC3Q9UHC3 531 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 TEKT2Q9UIF3 430 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 NAALAD2Q9Y3Q0 740 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 TEX15Q9BXT5 2789 aa8.72□□□□□ -1.01
CTNNA1-221ENST00000520339 CCDC88CQ9P219 2028 aa8.71□□□□□ -1.01
CTNNA1-221ENST00000520339 MDC1Q14676 2089 aaKnown RBP8.71□□□□□ -1.01
CTNNA1-221ENST00000520339 TRAV20A0A0B4J274 112 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 TRBC2A0A5B9 178 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 HMX2A2RU54 273 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 MAGEB17A8MXT2 336 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 CRYABP02511 175 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 MYBL2P10244 700 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 ADMP35318 185 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 AP1S2P56377 157 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF33BQ06732 778 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 HERC3Q15034 1050 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 NSDHLQ15738 373 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 EXT1Q16394 746 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 C21orf62-AS1Q17RA5 79 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 BTBD16Q32M84 506 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 ZNF766Q5HY98 468 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 ACER2Q5QJU3 275 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 CATSPEREQ5SY80 951 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 MFSD4BQ5TF39 518 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 STEAP4Q687X5 459 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 FCRLBQ6BAA4 426 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 SP5Q6BEB4 398 aaPredicted RBP8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 TRMT10BQ6PF06 316 aaKnown RBP8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 TMEM207Q6UWW9 146 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 FJX1Q86VR8 437 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 BEST3Q8N1M1 668 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 GPATCH11Q8N954 259 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 OR5T3Q8NGG3 340 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 SUN3Q8TAQ9 357 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 TP53INP1Q96A56 240 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 PYCR2Q96C36 320 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 PEX11GQ96HA9 241 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 PWWP2AQ96N64 755 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 OR1F2PQ96R84 312 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 NPAS2Q99743 824 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 OLFM1Q99784 485 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 TRIM54Q9BYV2 358 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 KCNK13Q9HB14 408 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 MMP25Q9NPA2 562 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 ARL15Q9NXU5 204 aa8.71□□□□□ -1.02
CTNNA1-221ENST00000520339 STOML1Q9UBI4 398 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms