RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 RHCGQ9UBD6 479 aa8.42□□□□□ -1.06
CSMD1-206ENST00000520002 SRRDQ9UH36 339 aa8.42□□□□□ -1.06
CSMD1-206ENST00000520002 A0A1B0GVC2 190 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NEMP2A6NFY4 417 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PRICKLE3O43900 615 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 RFPL3O75679 317 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 RAB36O95755 333 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ESR1P03372 595 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CAPNS1P04632 268 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 RAB4AP20338 218 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ADH7P40394 386 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 MSS51Q4VC12 460 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SPIN3Q5JUX0 258 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 FCAMRQ8WWV6 532 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ESAMQ96AP7 390 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SLC6A7Q99884 636 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 WDR45Q9Y484 360 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CDH10Q9Y6N8 788 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 A0A0G2JN53 185 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 AHSA1O95433 338 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CST3P01034 146 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GTF2F2P13984 249 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CCND3P30281 292 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 MAP3K8P41279 467 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CHRNA4P43681 627 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 APLP1P51693 650 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TAGLNQ01995 201 aaKnown RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NTRK2Q16620 822 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 OR5AK3PQ8NH89 298 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SMPDL3BQ92485 455 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ARL11Q969Q4 196 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NUSAP1Q9BXS6 441 aaKnown RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 MAGEH1Q9H213 219 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 MAN2C1Q9NTJ4 1040 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 STXBP5LQ9Y2K9 1186 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 MIA3Q5JRA6 1907 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TLX2O43763 284 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PCDH7O60245 1069 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ECI2O75521 394 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NFATC1O95644 943 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ASPAP45381 313 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GBX2P52951 348 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ATP6AP1Q15904 470 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PIM3Q86V86 326 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GLB1L3Q8NCI6 653 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SCAMP5Q8TAC9 235 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 HERVK_113Q902F9 699 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TCEAL7Q9BRU2 100 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 FAM118AQ9NWS6 357 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CALML5Q9NZT1 146 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SLC31A1O15431 190 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TFP02787 698 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 FHP07954 510 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CCKBRP32239 447 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ERVK-21P61565 698 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 UFM1P61960 85 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GAD2Q05329 585 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 RASGEF1BQ0VAM2 473 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 C2orf76Q3KRA6 126 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 BRSK1Q8TDC3 778 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ST7LQ8TDW4 575 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 LGALS12Q96DT0 336 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GIMAP2Q9UG22 337 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PCDHGA6Q9Y5G7 932 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 H0YAE9 185 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 OR7A17O14581 309 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GRK6P43250 576 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PUM1Q14671 1186 aaKnown RBP eCLIP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PAN3Q58A45 887 aaKnown RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NAPRTQ6XQN6 538 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SLC22A15Q8IZD6 547 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ZFP41Q8N8Y5 198 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 OR2T35Q8NGX2 323 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 OR2AJ1Q8NGZ0 328 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NPLQ9BXD5 320 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TMEM184CQ9NVA4 438 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PEX10O60683 326 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SLC34A2O95436 690 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 BPNT1O95861 308 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 GSTM2P28161 218 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NSG1P42857 185 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 FLT3LGP49771 235 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ARSFP54793 590 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CCDC71Q8IV32 467 aaPredicted RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 C1orf21Q9H246 121 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SYT4Q9H2B2 425 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PADI3Q9ULW8 664 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 PRPS2P11908 318 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SELPP16109 830 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 ZNF823P16415 610 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 UGT2A3Q6UWM9 527 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CCDC54Q8NEL0 328 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TAPBPLQ9BX59 468 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 TRIM36Q9NQ86 728 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 COPS3Q9UNS2 423 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 CEPT1Q9Y6K0 416 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NPIPA7E9PJI5 369 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 AIPO00170 330 aa8.41□□□□□ -1.06
CSMD1-206ENST00000520002 SRPRAP08240 638 aaKnown RBP8.41□□□□□ -1.06
CSMD1-206ENST00000520002 NPIPA8P0DM63 369 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms