RNA–Protein interactions for RNA: ENST00000519489.1

CTNNA1-216, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 358 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-216ENST00000519489 ZNF398Q8TD17 642 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM168AQ92567 244 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 PROX1Q92786 737 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 ZUFSPQ96AP4 578 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 C3orf49Q96BT1 292 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 ALKBH8Q96BT7 664 aaKnown RBP6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MCEEQ96PE7 176 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM111AQ96PZ2 611 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2A5Q96R48 311 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 MACROD1Q9BQ69 325 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 TUBA1CQ9BQE3 449 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 DRC3Q9H069 523 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 PDCL3Q9H2J4 239 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM96AQ9H5X1 160 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 CALHM2Q9HA72 323 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 PCDHB10Q9UN67 800 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 CAMK2AQ9UQM7 478 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM169AQ9Y6X4 670 aa6.12□□□□□ -1.43
CTNNA1-216ENST00000519489 SAGE2PA6NJ88 616 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 A8MVJ9 347 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 C16orf97H3BN30 126 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 SMAD9O15198 467 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 CGAP01215 116 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 CD48P09326 243 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 PRSS56P0CW18 603 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 APEHP13798 732 aaKnown RBP6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 PON1P27169 355 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 IL1R2P27930 398 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 GGT5P36269 586 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 SLC6A12P48065 614 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 CDKN1CP49918 316 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 GPR143P51810 404 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 DSCR9P59020 149 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 BTG2P78543 158 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 XIAPP98170 497 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 FMO1Q01740 532 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 FOXL1Q12952 345 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 ZBTB17Q13105 803 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 BRD3Q15059 726 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 CCSMST1Q4G0I0 132 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 KPRPQ5T749 579 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM47EQ6ZV65 393 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 SYDE1Q6ZW31 735 aaPredicted RBP6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 USP43Q70EL4 1123 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 PCGF5Q86SE9 256 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 DTX2Q86UW9 622 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 SCUBE1Q8IWY4 988 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2L3Q8NG85 312 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 OR5T3Q8NGG3 340 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2A1Q8NGT9 310 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 ZCCHC10Q8TBK6 192 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 NSMCE1Q8WV22 266 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 FBXW5Q969U6 566 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 CSPG4P5Q96PW8 444 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 RASL10BQ96S79 203 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 NTMT1Q9BV86 223 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 ADGRE3Q9BY15 652 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 UGT2B28Q9BY64 529 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 MMP27Q9H306 513 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 PIGMQ9H3S5 423 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 HPF1Q9NWY4 346 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 FBXW2Q9UKT8 454 aa6.11□□□□□ -1.43
CTNNA1-216ENST00000519489 STARD9Q9P2P6 4700 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 A0A1B0GVL5 298 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 AGAP14A8MT82 685 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 MFSD11O43934 449 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 B4GALT2O60909 372 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 TGM6O95932 706 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 FTCDO95954 541 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 F13A1P00488 732 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 MYL1P05976 194 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 ERVK-10P10266 1014 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PFKFB1P16118 471 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 IL1RNP18510 177 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 SYT1P21579 422 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 CA4P22748 312 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 BCL6P41182 706 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF165P49910 485 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 GSCP56915 257 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 UBA52P62987 128 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PCDH1Q08174 1060 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 RPA4Q13156 261 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 KLF1Q13351 362 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PKP1Q13835 747 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 FAM53BQ14153 422 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF672Q499Z4 452 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 C11orf71Q6IPW1 123 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 TMCO3Q6UWJ1 677 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 CLEC17AQ6ZS10 378 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PLD3Q8IV08 490 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 VRK3Q8IV63 474 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 SVOPLQ8N434 492 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 CLDN19Q8N6F1 224 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 KBTBD8Q8NFY9 601 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 OR2L8Q8NGY9 312 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 SPATA22Q8NHS9 363 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 ZNF418Q8TF45 676 aaPredicted RBP6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 FAF2Q96CS3 445 aa6.1□□□□□ -1.43
CTNNA1-216ENST00000519489 PEX11GQ96HA9 241 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms