RNA–Protein interactions for RNA: ENST00000518869.1

TMEM55A-203, humanhuman

TSL 5

Gene TMEM55A, Length 841 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-203ENST00000518869 ZNF490Q9ULM2 529 aaPredicted RBP12.43□□□□□ -0.42
TMEM55A-203ENST00000518869 CSAG2Q9Y5P2 127 aa12.43□□□□□ -0.42
TMEM55A-203ENST00000518869 A0A1B0GUH1 482 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TCRBV16S1A1N1A0A5B0 115 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 SAGE2PA6NJ88 616 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 UBXN8O00124 270 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 DYRK3O43781 588 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 CTNSO60931 367 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 SMIM24O75264 130 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 PCNAP12004 261 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 GP1BBP13224 206 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 PTX3P26022 381 aaPredicted RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 HNRNPH1P31943 449 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 PIK3CBP42338 1070 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 CLCN2P51788 898 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 RBPJQ06330 500 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 STX4Q12846 297 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 MRPL49Q13405 166 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 SERTAD2Q14140 314 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 E2F2Q14209 437 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 NAA30Q147X3 362 aaPredicted RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 SETDB1Q15047 1291 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 PFKFB4Q16877 469 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 ABHD17CQ6PCB6 329 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 LAS2Q8IYD9 372 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TMEM132CQ8N3T6 1108 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TEX9Q8N6V9 391 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 KCTD4Q8WVF5 259 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 SLC44A1Q8WWI5 657 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 DAZLQ92904 295 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TSLPQ969D9 159 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 ATP6V1E2Q96A05 226 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TMEM125Q96AQ2 219 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 DEFB126Q9BYW3 111 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 CDC42EP4Q9H3Q1 356 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 DMGDHQ9UI17 866 aaKnown RBP12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 DAPP1Q9UN19 280 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 TSC22D4Q9Y3Q8 395 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 CLCA3PQ9Y6N3 262 aa12.42□□□□□ -0.42
TMEM55A-203ENST00000518869 OR2W5A6NFC9 320 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 IFNA16P05015 189 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 CELA2AP08217 269 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 EEF1DP29692 281 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 PPP2R1BP30154 601 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 ARL1P40616 181 aaPredicted RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 CYB561P49447 251 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 RAP1GDS1P52306 607 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 CASP6P55212 293 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 SNRPNP63162 240 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 BTG2P78543 158 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 DLG1Q12959 904 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 BMPR2Q13873 1038 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 PCBP2Q15366 365 aaKnown RBP eCLIP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 ZNF766Q5HY98 468 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 GRHL2Q6ISB3 625 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 TRMT10CQ7L0Y3 403 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 LCA5Q86VQ0 697 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 BEST3Q8N1M1 668 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 NOA1Q8NC60 698 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 B3GNT7Q8NFL0 401 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 OR7G3Q8NG95 312 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 ELP5Q8TE02 316 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 ZNF473Q8WTR7 871 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 RGMAQ96B86 450 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 MTBPQ96DY7 904 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 VMP1Q96GC9 406 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 SCYL1Q96KG9 808 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 PAFAH2Q99487 392 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 CDCP1Q9H5V8 836 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 ADAP2Q9NPF8 381 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 RYDENQ9NUL5 291 aaKnown RBP12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 PSD3Q9NYI0 1048 aa12.41□□□□□ -0.42
TMEM55A-203ENST00000518869 IGKV3D-11A0A0A0MRZ8 115 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 EXOC1LA0A1B0GW35 172 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 GABRR3A8MPY1 467 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 FAM227AF5H4B4 570 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 POC1B-GALNT4F8VUJ3 575 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 KLK8O60259 260 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 MYO1DO94832 1006 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 B3GALT4O96024 378 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 SNRPAP09012 282 aaKnown RBP12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 COX7A2P14406 83 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 TNNI3P19429 210 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 MAOAP21397 527 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 CD96P40200 585 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 EFNA3P52797 238 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 LIM2P55344 173 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 TUBA3CQ13748 450 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 GTF2H2Q13888 395 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 RUNX2Q13950 521 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 OR1C1Q15619 314 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 ELAVL1Q15717 326 aaKnown RBP12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 KRTCAP3Q53RY4 240 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 FBXO48Q5FWF7 155 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 KHDRBS2Q5VWX1 349 aaKnown RBP12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 GTF2H2CQ6P1K8 395 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 TUBA3EQ6PEY2 450 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 CRLF3Q8IUI8 442 aa12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 CENPLQ8N0S6 344 aaPredicted RBP12.4□□□□□ -0.42
TMEM55A-203ENST00000518869 NR4A3Q92570 626 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms