RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 OR7G3Q8NG95 312 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 FBXO30Q8TB52 745 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SNX21Q969T3 373 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 JAKMIP1Q96N16 626 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 NEDD4LQ96PU5 975 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 C17orf62Q9BQA9 187 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 EGLN1Q9GZT9 426 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TMEM206Q9H813 350 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 GPR173Q9NS66 373 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 AIPL1Q9NZN9 384 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 THEGQ9P2T0 379 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SH3BGRL2Q9UJC5 107 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 FBXL5Q9UKA1 691 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 POMT2Q9UKY4 750 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 SATB2Q9UPW6 733 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 TRAF3IP3Q9Y228 551 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 NSG2Q9Y328 171 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 MRPL11Q9Y3B7 192 aaKnown RBP3.09□□□□□ -1.91
VPS13B-207ENST00000518569 PCDHGA1Q9Y5H4 931 aa3.09□□□□□ -1.91
VPS13B-207ENST00000518569 PDS5BQ9NTI5 1447 aa3.09□□□□□ -1.92
VPS13B-207ENST00000518569 EIF4G3O43432 1585 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 A0A1B0GU03 582 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 C2orf92A0A1B0GVN3 265 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 E9PQ18 207 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 TRAFD1O14545 582 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ST8SIA3O43173 380 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 TLX2O43763 284 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 NOL3O60936 208 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 MTRF1O75570 445 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 SORBS2O94875 1100 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 GUCA1CO95843 209 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 MT-ND3P03897 115 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 RHOXF2BP0C7M4 288 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 GOT1P17174 413 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 HLA-DPA1P20036 260 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 C4BPBP20851 252 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PDHA2P29803 388 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ERVK-16P61578 105 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 DHODHQ02127 395 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ARHGAP1Q07960 439 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ZNF177Q13360 481 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 ARMCX4Q5H9R4 360 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 TATDN1Q6P1N9 297 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 KDELC1Q6UW63 502 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 NHLRC1Q6VVB1 395 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 GBP6Q6ZN66 633 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 C5orf24Q7Z6I8 188 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 HOOK3Q86VS8 718 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 TUSC5Q8IXB3 177 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 NUP93Q8N1F7 819 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 METTL4Q8N3J2 472 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 GDAP1Q8TB36 358 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 KIAA1524Q8TCG1 905 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 LRRC15Q8TF66 581 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 TEKT1Q969V4 418 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 CFAP36Q96G28 342 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PRICKLE1Q96MT3 831 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PCDHB18PQ96TA0 734 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 LGMNQ99538 433 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PKP2Q99959 881 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 RHOXF2Q9BQY4 288 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 CABLES2Q9BTV7 478 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 UTP14AQ9BVJ6 771 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PAPOLGQ9BWT3 736 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 PARLQ9H300 379 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 RPAP3Q9H6T3 665 aaPredicted RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 HOXC10Q9NYD6 342 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 MIS18AQ9NYP9 233 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 NUDT4Q9NZJ9 180 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 SEPT10Q9P0V9 454 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 CGNQ9P2M7 1197 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 SUN2Q9UH99 717 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 HOOK1Q9UJC3 728 aaKnown RBP3.08□□□□□ -1.92
VPS13B-207ENST00000518569 GMEB2Q9UKD1 530 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 CFAP45Q9UL16 551 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 NEDD4P46934 1319 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 CEP164Q9UPV0 1460 aa3.08□□□□□ -1.92
VPS13B-207ENST00000518569 IGHV3OR16-10A0A075B7F0 116 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ANKDD1BA6NHY2 528 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 EPM2AB3EWF7 344 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 TCP10L2B9ZVM9 353 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SLC33A1O00400 549 aaPredicted RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 CTDSPLO15194 276 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 CTAGE5O15320 804 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 MAGEB2O15479 319 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SLC7A4O43246 635 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 ACSL4O60488 711 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 NEMFO60524 1076 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 NXPH4O95158 308 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 GH1P01241 217 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 C8orf89P0DMQ9 161 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 SFTPCP11686 197 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 CTNNA2P26232 953 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 GIFP27352 417 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 GPR183P32249 361 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 HSPA1LP34931 641 aa3.07□□□□□ -1.92
VPS13B-207ENST00000518569 RDXP35241 583 aaKnown RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 FEN1P39748 380 aaKnown RBP3.07□□□□□ -1.92
VPS13B-207ENST00000518569 KCNJ1P48048 391 aa3.07□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms