RNA–Protein interactions for RNA: ENST00000517026.1

SCARNA21-201, small Cajal body-specific RNA 21, humanhuman

BASIC

Gene SCARNA21, Length 139 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA21-201ENST00000517026 APOBEC4Q8WW27 367 aaKnown RBP13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 TBC1D20Q96BZ9 403 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 C8orf44Q96CB5 159 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 PKNOX2Q96KN3 472 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 KCNA7Q96RP8 456 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 HBEGFQ99075 208 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 TBCDQ9BTW9 1192 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 TRIM55Q9BYV6 548 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 VN1R1Q9GZP7 353 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 SSU72Q9NP77 194 aaKnown RBP13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 KCNK9Q9NPC2 374 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 LANCL2Q9NS86 450 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 SEMA3GQ9NS98 782 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 P4HTMQ9NXG6 502 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 TIMM22Q9Y584 194 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 COL12A1Q99715 3063 aa13.76□□□□□ -0.21
SCARNA21-201ENST00000517026 PEX12O00623 359 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 PLPP1O14494 284 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ALOX12BO75342 701 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 DNAJB5O75953 348 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ESRRBO95718 433 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 PDYNP01213 254 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 BPGMP07738 259 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 FHP07954 510 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 FAM87AP0C7U9 286 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 RNH1P13489 461 aaKnown RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 HTR6P50406 440 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 RAP1GDS1P52306 607 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 MTTPP55157 894 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 FOXA1P55317 472 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 AP5B1Q2VPB7 878 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 OR4C11Q6IEV9 310 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SCIMPQ6UWF3 145 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ZCCHC23Q6ZST2 131 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 AMER2Q8N7J2 671 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 EXD3Q8N9H8 876 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ACOT4Q8N9L9 421 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SRFBP1Q8NEF9 429 aaKnown RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SELENOMQ8WWX9 145 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 RGMAQ96B86 450 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ARL8AQ96BM9 186 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 MAGEB10Q96LZ2 347 aaPredicted RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 KCNC2Q96PR1 638 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SERINC2Q96SA4 455 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SLC29A3Q9BZD2 475 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 COPS7BQ9H9Q2 264 aaPredicted RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 CLK4Q9HAZ1 481 aaKnown RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ARGLU1Q9NWB6 273 aaPredicted RBP13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 FBXL4Q9UKA2 621 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 SNX6Q9UNH7 406 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 ACTL7BQ9Y614 415 aa13.75□□□□□ -0.21
SCARNA21-201ENST00000517026 BOD1L1Q8NFC6 3051 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 A0A088AWK7 358 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 WDR91A4D1P6 747 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 GOLGA6L10A6NI86 522 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 EEDO75530 441 aaKnown RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 IGHEP01854 428 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 CHN1P15882 459 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 ZNF10P21506 573 aaPredicted RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 IL10P22301 178 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 HIST1H1TP22492 207 aaPredicted RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SERPINB3P29508 390 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 HMOX2P30519 316 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SSR2P43308 183 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SERPINB4P48594 390 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 CCL11P51671 97 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 LIM2P55344 173 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 POLE2P56282 527 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 MAGOHP61326 146 aaKnown RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 BTG2P78543 158 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 RHAGQ02094 409 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 EEF1A2Q05639 463 aaKnown RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 LANCL3Q6ZV70 420 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 HDXQ7Z353 690 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 TMEM52Q8NDY8 209 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 OR11G2Q8NGC1 345 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 TSLPQ969D9 159 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 TLCD1Q96CP7 247 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 OR1F2PQ96R84 312 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SERPINI1Q99574 410 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 MAPKAP1Q9BPZ7 522 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 ARHGAP9Q9BRR9 750 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 CENPKQ9BS16 269 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 NPLQ9BXD5 320 aaPredicted RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 ZNF717Q9BY31 904 aaPredicted RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 ING2Q9H160 280 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 STMN4Q9H169 189 aaPredicted RBP13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 MLXIPLQ9NP71 852 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 PSD3Q9NYI0 1048 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 KCMF1Q9P0J7 381 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SLC12A4Q9UP95 1085 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 STK38LQ9Y2H1 464 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 SCN3AQ9NY46 2000 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 PCSK5Q92824 1860 aa13.74□□□□□ -0.21
SCARNA21-201ENST00000517026 UBR5O95071 2799 aaPredicted RBP13.73□□□□□ -0.21
SCARNA21-201ENST00000517026 IGHV3-20A0A0C4DH32 117 aa13.73□□□□□ -0.21
SCARNA21-201ENST00000517026 A6NL46 340 aa13.73□□□□□ -0.21
SCARNA21-201ENST00000517026 ERVH48-1M5A8F1 160 aa13.73□□□□□ -0.21
SCARNA21-201ENST00000517026 PSMD12O00232 456 aaPredicted RBP13.73□□□□□ -0.21
SCARNA21-201ENST00000517026 SCELO95171 688 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms