RNA–Protein interactions for RNA: ENST00000516258.1

RNU4-71P-201, Transcript of RNA, U4 small nuclear 71, pseudogene, humanhuman

BASIC

Gene RNU4-71P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-71P-201ENST00000516258 CCDC14Q49A88 953 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 RAB41Q5JT25 222 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 LIPJQ5W064 366 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 C2orf66Q6UXQ4 117 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 ANKRD33Q7Z3H0 272 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 TRMT11Q7Z4G4 463 aaKnown RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 PIGWQ7Z7B1 504 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 ERI1Q8IV48 349 aaKnown RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 ZNF786Q8N393 782 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 LIPHQ8WWY8 451 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 PLEKHF1Q96S99 279 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 CPNE1Q99829 537 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 TNMDQ9H2S6 317 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 GOLPH3LQ9H4A5 285 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 RNF121Q9H920 327 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 AMBNQ9NP70 447 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 HPS4Q9NQG7 708 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 SUCLA2Q9P2R7 463 aaPredicted RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 ORC3Q9UBD5 711 aaPredicted RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 CRNNQ9UBG3 495 aaPredicted RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 CPSF3Q9UKF6 684 aaKnown RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 HBS1LQ9Y450 684 aaKnown RBP0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 SLIT3O75094 1523 aa0.68□□□□□ -2.3
RNU4-71P-201ENST00000516258 CCDC189A1A4V9 331 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 TCP10L2B9ZVM9 353 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 NPHP1O15259 732 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 STBD1O95210 358 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 DNTTP04053 509 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 SAGP10523 405 aaPredicted RBP0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 PFKFB1P16118 471 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 TBPP20226 339 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 CHMP24386 653 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 RBBP4Q09028 425 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 EGFEM1PQ0D2K5 195 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 GRB14Q14449 540 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 GPNMBQ14956 572 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 HERPUD1Q15011 391 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 LRRC37A5PQ49AS3 106 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 CBWD6Q4V339 395 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 CBWD3Q5JTY5 395 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 FAAH2Q6GMR7 532 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 KRTAP5-10Q6L8G5 202 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 TBC1D10CQ8IV04 446 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 TTC39CQ8N584 583 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 CD99L2Q8TCZ2 262 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 PCDHB18PQ96TA0 734 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 FEVQ99581 238 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 TXNDC16Q9P2K2 825 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 PRODH2Q9UF12 536 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 SATB2Q9UPW6 733 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 GPR179Q6PRD1 2367 aa0.67□□□□□ -2.3
RNU4-71P-201ENST00000516258 MUC16Q8WXI7 14507 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 SCGB1D1O95968 90 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 IGLV3-19P01714 112 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 LINGO3P0C6S8 592 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 AZGP1P25311 298 aaKnown RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 P2RY4P51582 365 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 BACE1P56817 501 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 SETQ01105 290 aaPredicted RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 CACNG1Q06432 222 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 OVGP1Q12889 678 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 PTGES3Q15185 160 aaKnown RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 MPPED2Q15777 294 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 PRR4Q16378 134 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 C14orf28Q4W4Y0 310 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 HAUS3Q68CZ6 603 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 LRRC31Q6UY01 552 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 RYBPQ8N488 228 aaPredicted RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 ANKRD13CQ8N6S4 541 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 ATL1Q8WXF7 558 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 DEDD2Q8WXF8 326 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 ZNF622Q969S3 477 aaKnown RBP eCLIP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 SEC62Q99442 399 aaKnown RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 CDX2Q99626 313 aaPredicted RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 KIR2DL4Q99706 377 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 CUEDC2Q9H467 287 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 SMARCAD1Q9H4L7 1026 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 EXOC1Q9NV70 894 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 TMEM98Q9Y2Y6 226 aa0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 PRG3Q9Y2Y8 225 aaPredicted RBP0.66□□□□□ -2.3
RNU4-71P-201ENST00000516258 A8MX80 341 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 AGR2O95994 175 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 CCDC159P0C7I6 412 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 GOT1P17174 413 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 CTNNA2P26232 953 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 IL2RGP31785 369 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 NRIP1P48552 1158 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 ASCL1P50553 236 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 UBASH3AP57075 661 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 CREB5Q02930 508 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 ILF2Q12905 390 aaKnown RBP0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 ASAH1Q13510 395 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 SNAPC1Q16533 368 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 PTGISQ16647 500 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 LACTB2Q53H82 288 aaPredicted RBP0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 TTC27Q6P3X3 843 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 IL34Q6ZMJ4 242 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 C1orf131Q8NDD1 294 aaKnown RBP0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 BEST4Q8NFU0 473 aa0.65□□□□□ -2.31
RNU4-71P-201ENST00000516258 SEPT1Q8WYJ6 367 aa0.65□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms