RNA–Protein interactions for RNA: ENST00000515620.5

CLDND1-231, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 663 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-231ENST00000515620 ALG3Q92685 438 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 ALKBH8Q96BT7 664 aaKnown RBP9.7□□□□□ -0.86
CLDND1-231ENST00000515620 PERPQ96FX8 193 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SCYL1Q96KG9 808 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SLC30A3Q99726 388 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 PCBD2Q9H0N5 130 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SLC6A15Q9H2J7 730 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SEMA4BQ9NPR2 832 aaPredicted RBP9.7□□□□□ -0.86
CLDND1-231ENST00000515620 TREX1Q9NSU2 369 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SACM1LQ9NTJ5 587 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 MYOTQ9UBF9 498 aa9.7□□□□□ -0.86
CLDND1-231ENST00000515620 ZNF629Q9UEG4 869 aaPredicted RBP9.7□□□□□ -0.86
CLDND1-231ENST00000515620 SONP18583 2426 aaKnown RBP9.7□□□□□ -0.86
CLDND1-231ENST00000515620 GOLGA6L9A6NEM1 432 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 CES2O00748 559 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 OR1F1O43749 312 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 ZBTB14O43829 449 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 MFAP3LO75121 409 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 AVILO75366 819 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 VAPBO95292 243 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 MBD3O95983 291 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 P04436 131 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 CCL3P10147 92 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 ARNTP27540 789 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 NMBRP28336 390 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 CEACAM8P31997 349 aaPredicted RBP9.69□□□□□ -0.86
CLDND1-231ENST00000515620 FDFT1P37268 417 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 HNF4AP41235 474 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 CLCN7P51798 805 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 GPR143P51810 404 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 AGFG1P52594 562 aaKnown RBP9.69□□□□□ -0.86
CLDND1-231ENST00000515620 RWDD2BP57060 319 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 RAB8AP61006 207 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PWP1Q13610 501 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 HYAL4Q2M3T9 481 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 TTLL9Q3SXZ7 439 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PCID2Q5JVF3 399 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 ARHGAP21Q5T5U3 1957 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 HMBOX1Q6NT76 420 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 MRNIPQ6NTE8 343 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 NIPAL1Q6NVV3 410 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PRSS57Q6UWY2 283 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 SDCCAG8Q86SQ7 713 aaPredicted RBP9.69□□□□□ -0.86
CLDND1-231ENST00000515620 SLC35B2Q8TB61 432 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PIGTQ969N2 578 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PIP5K1AQ99755 562 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 ZNF703Q9H7S9 590 aaPredicted RBP9.69□□□□□ -0.86
CLDND1-231ENST00000515620 PPIEQ9UNP9 301 aaKnown RBP9.69□□□□□ -0.86
CLDND1-231ENST00000515620 ATG4BQ9Y4P1 393 aa9.69□□□□□ -0.86
CLDND1-231ENST00000515620 MPDZO75970 2070 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 SH3D21A4FU49 640 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 TGFBR3LH3BV60 316 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 GFYI3L273 518 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 PFDN6O15212 129 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 EPPINO95925 133 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 IL2RAP01589 272 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 TPM3P06753 285 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 APRTP07741 180 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 MPC1LP0DKB6 136 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 PIGAP37287 484 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 MAGEA1P43355 309 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 TRPC1P48995 793 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 HK2P52789 917 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 ADARP55265 1226 aaKnown RBP9.68□□□□□ -0.86
CLDND1-231ENST00000515620 RGS1Q08116 209 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 CES3Q6UWW8 571 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 MBOAT1Q6ZNC8 495 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 UBE2R2Q712K3 238 aaPredicted RBP9.68□□□□□ -0.86
CLDND1-231ENST00000515620 PIWIL4Q7Z3Z4 852 aaKnown RBP9.68□□□□□ -0.86
CLDND1-231ENST00000515620 LACC1Q8IV20 430 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 LIX1Q8N485 282 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 GOLM1Q8NBJ4 401 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 UTP15Q8TED0 518 aaKnown RBP9.68□□□□□ -0.86
CLDND1-231ENST00000515620 TMEM158Q8WZ71 300 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 SMPDL3BQ92485 455 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 HSPBAP1Q96EW2 488 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 DACH2Q96NX9 599 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 GBP4Q96PP9 640 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 CCL19Q99731 98 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 EPB41L4BQ9H329 900 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 RAB6BQ9NRW1 208 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 MMACHCQ9Y4U1 282 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 PCDHGB3Q9Y5G1 929 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.68□□□□□ -0.86
CLDND1-231ENST00000515620 ARID1AO14497 2285 aa9.68□□□□□ -0.86
CLDND1-231ENST00000515620 CHD3Q12873 2000 aaKnown RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 GOLGA6L19H0YKK7 550 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 CNOT4O95628 575 aaKnown RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 IFNB1P01574 187 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 F7P08709 466 aaPredicted RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 TPM1P09493 284 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 RFPL3SP0C7P2 107 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 NID1P14543 1247 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 HOXB1P14653 301 aaPredicted RBP9.67□□□□□ -0.86
CLDND1-231ENST00000515620 TIMP3P35625 211 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 CCR8P51685 355 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 SLC13A2Q13183 592 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 NAE1Q13564 534 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 BMPR2Q13873 1038 aa9.67□□□□□ -0.86
CLDND1-231ENST00000515620 SIX1Q15475 284 aaPredicted RBP9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms