RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 NPY4RP50391 375 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 NAGLUP54802 743 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 MFAP3P55082 362 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 IL10RBQ08334 325 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 RNF212Q495C1 297 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 SHEQ5VZ18 495 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 TTC27Q6P3X3 843 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 SLC25A42Q86VD7 318 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 LRTM2Q8N967 370 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 NSMAFQ92636 917 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 P2RX5Q93086 422 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 AK8Q96MA6 479 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 GDAP1L1Q96MZ0 367 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 ATF6BQ99941 703 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 CHCHD5Q9BSY4 110 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 FAM129AQ9BZQ8 928 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 RAVER2Q9HCJ3 691 aaKnown RBP3.04□□□□□ -1.92
LINC01088-211ENST00000515597 LAMC1P11047 1609 aa3.04□□□□□ -1.92
LINC01088-211ENST00000515597 EFCAB6Q5THR3 1501 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 NCOA3Q9Y6Q9 1424 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TNKS1BP1Q9C0C2 1729 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 MARF1Q9Y4F3 1742 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 IGLV4-3A0A075B6K6 122 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 IQCMA0A1B0GVH7 501 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 MTMR11A4FU01 709 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 HTR3EA5X5Y0 456 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 SHISA9B4DS77 424 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TMEM150CB9EJG8 249 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 CYTIPO60759 359 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 RPN1P04843 607 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 VIMP08670 466 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 CLCN4P51793 760 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 OR1D5P58170 312 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TRA2BP62995 288 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 FCHO2Q0JRZ9 810 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TFCP2Q12800 502 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TNK1Q13470 666 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TWISTNBQ3B726 338 aaPredicted RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 ATP1A1-AS1Q5TC04 95 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 FAM91A1Q658Y4 838 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 DZIP1Q86YF9 867 aaKnown RBP3.03□□□□□ -1.92
LINC01088-211ENST00000515597 FAM219AQ8IW50 185 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 C4orf19Q8IY42 314 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 THNSL1Q8IYQ7 743 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 PRSS35Q8N3Z0 413 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 TCEANCQ8N8B7 351 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 RAD54LQ92698 747 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 ZNF597Q96LX8 424 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 PSMB7Q99436 277 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 NDNQ99608 321 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 INPP5KQ9BT40 448 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 EDEM3Q9BZQ6 932 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 DNAI2Q9GZS0 605 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 EXOC1Q9NV70 894 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 GTSE1Q9NYZ3 720 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 HACD3Q9P035 362 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 FBXL4Q9UKA2 621 aa3.03□□□□□ -1.92
LINC01088-211ENST00000515597 ZFYVE9O95405 1425 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 ADGRL3Q9HAR2 1447 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 ADCY9O60503 1353 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 IGHV3-20A0A0C4DH32 117 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 IGHV3-38A0A0C4DH36 116 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 TRAFD1O14545 582 aaPredicted RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 WDR46O15213 610 aaKnown RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 GALR3O60755 368 aaPredicted RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 TSPY3P0CV98 308 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 TSPY8P0CW00 308 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 TCF4P15884 667 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 CRKLP46109 303 aaKnown RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 CDX1P47902 265 aaPredicted RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 CLDN17P56750 224 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 CDO1Q16878 200 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 SUSD4Q5VX71 490 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 MACC1Q6ZN28 852 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 CPEB2Q7Z5Q1 589 aaKnown RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 METTL23Q86XA0 190 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 HEXDCQ8WVB3 486 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 IL12RB2Q99665 862 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 PI4K2AQ9BTU6 479 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 NACAP1Q9BZK3 213 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 PRO0461Q9UI25 63 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 PILRBQ9UKJ0 227 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 RUVBL2Q9Y230 463 aaKnown RBP3.02□□□□□ -1.93
LINC01088-211ENST00000515597 COLEC10Q9Y6Z7 277 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 PCNTO95613 3336 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 C1orf167Q5SNV9 1468 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 RGPD1P0DJD0 1748 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 KIAA1107Q9UPP5 1409 aa3.02□□□□□ -1.93
LINC01088-211ENST00000515597 RNF123Q5XPI4 1314 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 TRAV18A0A075B6X5 111 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 NKX6-3A6NJ46 265 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 A8MVM7 634 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 PHOX2AO14813 284 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 FLRT2O43155 660 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GPRIN2O60269 458 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GBAP04062 536 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 CD59P13987 128 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GP9P14770 177 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 ADRA2CP18825 462 aa3.01□□□□□ -1.93
LINC01088-211ENST00000515597 GP5P40197 560 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms