RNA–Protein interactions for RNA: ENST00000515397.1

VCAN-212, Transcript of versican, humanhuman

TSL 2

Gene VCAN, Length 536 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-212ENST00000515397 IL10P22301 178 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 JAK1P23458 1154 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ARL1P40616 181 aaPredicted RBP10.78□□□□□ -0.68
VCAN-212ENST00000515397 CASP2P42575 452 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 MAGEA12P43365 314 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 SERPINB9P50453 376 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ALDH18A1P54886 795 aaKnown RBP10.78□□□□□ -0.68
VCAN-212ENST00000515397 LIM2P55344 173 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ID2Q02363 134 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 GTF2H2Q13888 395 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ZNF169Q14929 603 aaPredicted RBP10.78□□□□□ -0.68
VCAN-212ENST00000515397 TBCCQ15814 346 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 CPSF6Q16630 551 aaKnown RBP eCLIP10.78□□□□□ -0.68
VCAN-212ENST00000515397 ADPRMQ3LIE5 342 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 PAGE2BQ5JRK9 111 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ABHD17BQ5VST6 288 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 PLAG1Q6DJT9 500 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 GTF2H2CQ6P1K8 395 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 MED27Q6P2C8 311 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 RIPOR1Q6ZS17 1223 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 GOLGA7Q7Z5G4 137 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 CRLF3Q8IUI8 442 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 BEST3Q8N1M1 668 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 OR2L5Q8NG80 312 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 HUS1BQ8NHY5 278 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 PRR7Q8TB68 274 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 GRHL3Q8TE85 626 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 DOK4Q8TEW6 326 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 THAP3Q8WTV1 239 aaPredicted RBP10.78□□□□□ -0.68
VCAN-212ENST00000515397 LPAR4Q99677 370 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 MAPKAP1Q9BPZ7 522 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 MS4A8Q9BY19 250 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 HES7Q9BYE0 225 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 EPB41L4BQ9H329 900 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 CDCP1Q9H5V8 836 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 NOL11Q9H8H0 719 aaKnown RBP10.78□□□□□ -0.68
VCAN-212ENST00000515397 IPPKQ9H8X2 491 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 ACTR8Q9H981 624 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 COPG2Q9UBF2 871 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 XPR1Q9UBH6 696 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 TBK1Q9UHD2 729 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 FBXW2Q9UKT8 454 aa10.78□□□□□ -0.68
VCAN-212ENST00000515397 SPTAN1Q13813 2472 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 NUP210LQ5VU65 1888 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 A0A1B0GTL3 188 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 CYR61O00622 381 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 KLK8O60259 260 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SEMA7AO75326 666 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SHBGP04278 402 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SBK3P0C264 359 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 ATP5A1P25705 553 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 TNFSF10P50591 281 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 RAB38P57729 211 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SLC26A5P58743 744 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 RPS13P62277 151 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 SKP1P63208 163 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SLC13A2Q13183 592 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 LAPTM5Q13571 262 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 UBAP2LQ14157 1087 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 TLR1Q15399 786 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 SGO1Q5FBB7 561 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 ACER2Q5QJU3 275 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 GRHL2Q6ISB3 625 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 TRIM40Q6P9F5 258 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 QSOX2Q6ZRP7 698 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 TRMT10CQ7L0Y3 403 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 OR4N5Q8IXE1 308 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 LAS2Q8IYD9 372 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 ACOT4Q8N9L9 421 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 GALNT11Q8NCW6 608 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 OR52B6Q8NGF0 335 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 M1APQ8TC57 530 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 HAS2Q92819 552 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 UCN3Q969E3 161 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 ISL2Q96A47 359 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 TXLNGYQ9BZA5 131 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 PITHD1Q9GZP4 211 aaPredicted RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 COPS7BQ9H9Q2 264 aaPredicted RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 LIN28AQ9H9Z2 209 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 PRDM9Q9NQV7 894 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 PRTFDC1Q9NRG1 225 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 KCMF1Q9P0J7 381 aa10.77□□□□□ -0.69
VCAN-212ENST00000515397 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.69
VCAN-212ENST00000515397 USP9YO00507 2555 aaPredicted RBP10.76□□□□□ -0.69
VCAN-212ENST00000515397 IGKV3D-11A0A0A0MRZ8 115 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 TCRBV16S1A1N1A0A5B0 115 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 ARHGAP10A1A4S6 786 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 E2F3O00716 465 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 OR7A17O14581 309 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 PCDH17O14917 1159 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 LDB3O75112 727 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 PRKRAO75569 313 aaKnown RBP10.76□□□□□ -0.69
VCAN-212ENST00000515397 MYO1DO94832 1006 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 CBX6O95503 412 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 ETHE1O95571 254 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 GBAP04062 536 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 RBP1P09455 135 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 RNF224P0DH78 156 aa10.76□□□□□ -0.69
VCAN-212ENST00000515397 MTTPP55157 894 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms