RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 TAAR2Q9P1P5 351 aa14.19□□□□□ -0.14
NUP54-217ENST00000514987 PCDH10Q9P2E7 1040 aa14.19□□□□□ -0.14
NUP54-217ENST00000514987 FAM32AQ9Y421 112 aaKnown RBP14.19□□□□□ -0.14
NUP54-217ENST00000514987 ZNF451Q9Y4E5 1061 aa14.19□□□□□ -0.14
NUP54-217ENST00000514987 PCDHGA10Q9Y5H3 936 aa14.19□□□□□ -0.14
NUP54-217ENST00000514987 ARRDC5A6NEK1 342 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 IGLON5A6NGN9 336 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 CACNB4O00305 520 aaPredicted RBP14.18□□□□□ -0.14
NUP54-217ENST00000514987 PLPP1O14494 284 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 BCAS1O75363 584 aaPredicted RBP14.18□□□□□ -0.14
NUP54-217ENST00000514987 PDE9AO76083 593 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 INMTO95050 263 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 GABARAPO95166 117 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 PCCBP05166 539 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 ACVR2AP27037 513 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 GGT2P36268 569 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 MAGEA8P43361 318 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 HMGA2P52926 109 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 SPIBQ01892 262 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 PIGFQ07326 219 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 BNIP3Q12983 259 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 WSCD2Q2TBF2 565 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 REEP3Q6NUK4 255 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 KLHL35Q6PF15 583 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 ZNF852Q6ZMS4 543 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 SLC16A12Q6ZSM3 486 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 P3H2Q8IVL5 708 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 TTLQ8NG68 377 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 OR10G2Q8NGC3 310 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 TRUB1Q8WWH5 349 aaKnown RBP14.18□□□□□ -0.14
NUP54-217ENST00000514987 RGMAQ96B86 450 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 NEURL3Q96EH8 262 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 PIP5K1AQ99755 562 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 RAB11FIP5Q9BXF6 653 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 SLC6A16Q9GZN6 736 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 RSPH9Q9H1X1 276 aaPredicted RBP14.18□□□□□ -0.14
NUP54-217ENST00000514987 A4GALTQ9NPC4 353 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 SLC23A2Q9UGH3 650 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 TAC3Q9UHF0 121 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 TESMINQ9Y4I5 508 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 MAP4K5Q9Y4K4 846 aa14.18□□□□□ -0.14
NUP54-217ENST00000514987 PDPK1O15530 556 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 KAT7O95251 611 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ZNF12P17014 697 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 RHCEP18577 417 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 C5AR1P21730 350 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 GALK1P51570 392 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 C21orf59P57076 290 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ERVK-21P61565 698 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 KCNC4Q03721 635 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 OCA2Q04671 838 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 IER5LQ5T953 404 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 TSEN54Q7Z6J9 526 aaKnown RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 ADGRD2Q7Z7M1 963 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 NUDT13Q86X67 352 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 YAF2Q8IY57 180 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 MYDGFQ969H8 173 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 YIPF6Q96EC8 236 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PDXPQ96GD0 296 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 CSF3RQ99062 836 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 FEVQ99581 238 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 RMI1Q9H9A7 625 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PHPT1Q9NRX4 125 aaPredicted RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 TBCCD1Q9NVR7 557 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PLAGL1Q9UM63 463 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ENPP4Q9Y6X5 453 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PRRC2BQ5JSZ5 2229 aaKnown RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 C5orf58C9J3I9 102 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PCDH8O95206 1070 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 APODP05090 189 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 CD247P20963 164 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 FCARP24071 287 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 GJA4P35212 333 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 DRD3P35462 400 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 BSGP35613 385 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 XCR1P46094 333 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 SERPINB10P48595 397 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 MANFP55145 182 aaKnown RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 CST6Q15828 149 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 CTF1Q16619 201 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 SAXO2Q658L1 398 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 FAM92BQ6ZTR7 304 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 SPRED2Q7Z698 418 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PARP8Q8N3A8 854 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 SLC5A8Q8N695 610 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 DENND6BQ8NEG7 585 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 TM4SF18Q96CE8 201 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ZBED6CLQ96FA7 236 aaPredicted RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 TIMM29Q9BSF4 260 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ACAT2Q9BWD1 397 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 LMAN2LQ9H0V9 348 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 WDR26Q9H7D7 661 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ACOT13Q9NPJ3 140 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 ACSS1Q9NUB1 689 aaPredicted RBP14.17□□□□□ -0.14
NUP54-217ENST00000514987 ZSCAN32Q9NX65 697 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 B3GNT3Q9Y2A9 372 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PRKAB1Q9Y478 270 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 PCDHGA6Q9Y5G7 932 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 STON1Q9Y6Q2 735 aa14.17□□□□□ -0.14
NUP54-217ENST00000514987 NDUFS4O43181 175 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms