RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 INTS10Q9NVR2 710 aaKnown RBP10.13□□□□□ -0.79
DDX41-216ENST00000513562 ALKBH4Q9NXW9 302 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 SAMD15Q9P1V8 674 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 MYOTQ9UBF9 498 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 VPS9D1Q9Y2B5 631 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 MMACHCQ9Y4U1 282 aa10.13□□□□□ -0.79
DDX41-216ENST00000513562 TRGV5A0A0B4J1U4 118 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 A0A1W2PPR1 153 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 TRBC2A0A5B9 178 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 GRID2IPA4D2P6 1211 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 AKR1B15C9JRZ8 316 aaPredicted RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 OR1F1O43749 312 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 LIASO43766 372 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 HRGP04196 525 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 ETS1P14921 441 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 CCND1P24385 295 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 PPP2R1BP30154 601 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 CEACAM8P31997 349 aaPredicted RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 DNASE1L1P49184 302 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 CCR8P51685 355 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 SPA17Q15506 151 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 ZNF750Q32MQ0 723 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 HECTD2Q5U5R9 776 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 AGTRAPQ6RW13 159 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 CES3Q6UWW8 571 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 RTL4Q6ZR62 310 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 FAM47EQ6ZV65 393 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 PIWIL4Q7Z3Z4 852 aaKnown RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 PRUNE1Q86TP1 453 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 KIF18BQ86Y91 864 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 LINC01560Q8TB33 94 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 SGCZQ96LD1 299 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 EIF2B3Q9NR50 452 aaKnown RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 PNO1Q9NRX1 252 aaKnown RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 TRMT1Q9NXH9 659 aaKnown RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 TUBA8Q9NY65 449 aaPredicted RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 BFARQ9NZS9 450 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 ZNF629Q9UEG4 869 aaPredicted RBP10.12□□□□□ -0.79
DDX41-216ENST00000513562 CLDN16Q9Y5I7 305 aa10.12□□□□□ -0.79
DDX41-216ENST00000513562 BTNL10A8MVZ5 291 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 TGFBR3LH3BV60 316 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 AP3B1O00203 1094 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 EIF3FO00303 357 aaPredicted RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 WWP2O00308 870 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 AVILO75366 819 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 SERPIND1P05546 499 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 SMIM10L1P0DMW3 83 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 NPPBP16860 134 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 SCTRP47872 440 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 NPY2RP49146 381 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 NAP1L1P55209 391 aaKnown RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 RAB8AP61006 207 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 NAE1Q13564 534 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 BBS9Q3SYG4 887 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ACSF3Q4G176 576 aaPredicted RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 KIAA0930Q6ICG6 404 aaPredicted RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 ZNF549Q6P9A3 640 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 PRSS57Q6UWY2 283 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 MBOAT1Q6ZNC8 495 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 CAPN12Q6ZSI9 719 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 MAATS1Q7Z4T9 603 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 P3H2Q8IVL5 708 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 CPNE9Q8IYJ1 553 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 CCDC170Q8IYT3 715 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 CA13Q8N1Q1 262 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 VWA5B2Q8N398 1253 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 TNIP2Q8NFZ5 429 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 CD200R1Q8TD46 325 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ZNF592Q92610 1267 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 SMIM10Q96HG1 83 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 Q96MF0 132 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 PIP5K1AQ99755 562 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 YIPF4Q9BSR8 244 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 HAUS8Q9BT25 410 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 RHBGQ9H310 441 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 EXO5Q9H790 373 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ZNF703Q9H7S9 590 aaPredicted RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 SEMA4BQ9NPR2 832 aaPredicted RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 SACM1LQ9NTJ5 587 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 SYBUQ9NX95 663 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 PAK5Q9P286 719 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ZFP69BQ9UJL9 534 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ADAMTS6Q9UKP5 1117 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 PDE10AQ9Y233 779 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 DHRS7Q9Y394 339 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ATG4BQ9Y4P1 393 aa10.11□□□□□ -0.79
DDX41-216ENST00000513562 ANK3Q12955 4377 aaKnown RBP10.11□□□□□ -0.79
DDX41-216ENST00000513562 CTAGE15A4D2H0 777 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 C4orf51C9J302 202 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 SMAD7O15105 426 aaKnown RBP10.1□□□□□ -0.79
DDX41-216ENST00000513562 EPPINO95925 133 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 P04436 131 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 CCL3P10147 92 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 MGAT1P26572 445 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 TIMP3P35625 211 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 AHRP35869 848 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 ZNF136P52737 540 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 HK2P52789 917 aa10.1□□□□□ -0.79
DDX41-216ENST00000513562 TBX2Q13207 712 aaPredicted RBP10.1□□□□□ -0.79
DDX41-216ENST00000513562 CTBP1Q13363 440 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms