RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 PPP4R1Q8TF05 950 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP15.15■□□□□ 0.025e-8■■■■■ 65.3
PDLIM5-212ENST00000509333 C19orf60Q96EN9 201 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 CMTM7Q96FZ5 175 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 CCDC77Q9BR77 488 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 TBCDQ9BTW9 1192 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 NTMT1Q9BV86 223 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 MRPL46Q9H2W6 279 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 OR51B5Q9H339 312 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 CLMPQ9H6B4 373 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 NOL11Q9H8H0 719 aaKnown RBP15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 ANKZF1Q9H8Y5 726 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 ACTR8Q9H981 624 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 ZBTB26Q9HCK0 441 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 TMEM216Q9P0N5 145 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 DAPP1Q9UN19 280 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 PCDHGA11Q9Y5H2 935 aa15.15■□□□□ 0.02
PDLIM5-212ENST00000509333 IQANK1A0A1B0GTG1 560 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 TCRBV16S1A1N1A0A5B0 115 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 A8MUI8 341 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 PSMD12O00232 456 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 SMIM24O75264 130 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 SH3BGRLO75368 114 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 PCNAP12004 261 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 MAOAP21397 527 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 ATP5A1P25705 553 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 EEF1DP29692 281 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 SERPINB1P30740 379 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 PIK3CGP48736 1102 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 LIM2P55344 173 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 RAB38P57729 211 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 TGM3Q08188 693 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 BTBD16Q32M84 506 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 PAPD4Q6PIY7 484 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 ZNF793Q6ZN11 406 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 ACOT4Q8N9L9 421 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 TMEM52Q8NDY8 209 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 NFAM1Q8NET5 270 aaPredicted RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 SNRNP40Q96DI7 357 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 LPAR4Q99677 370 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 BARD1Q99728 777 aaKnown RBP15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 MMP25Q9NPA2 562 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 MMACHCQ9Y4U1 282 aa15.14■□□□□ 0.01
PDLIM5-212ENST00000509333 UBR5O95071 2799 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 A0A088AWK7 358 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 A0A1W2PPM1 405 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 RTCAO00442 366 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PPP6CO00743 305 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 CTNSO60931 367 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 FLNBO75369 2602 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 SCELO95171 688 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 CLDN9O95484 217 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 SHBGP04278 402 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 ZNF10P21506 573 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PTX3P26022 381 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 NEK2P51955 445 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 HNRNPFP52597 415 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 HSD17B7P56937 341 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 EXT1Q16394 746 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 CPSF6Q16630 551 aaKnown RBP eCLIP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 AP5B1Q2VPB7 878 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PRR30Q53SZ7 412 aaPredicted RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 KHDRBS2Q5VWX1 349 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 LCA5Q86VQ0 697 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 CYP4X1Q8N118 509 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 OR52B6Q8NGF0 335 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 WDR20Q8TBZ3 569 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 ACMSDQ8TDX5 336 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 ELP5Q8TE02 316 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 ATP6V1E2Q96A05 226 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 NSUN5Q96P11 429 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 KCNC2Q96PR1 638 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 MTERF1Q99551 399 aaKnown RBP15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 C1QTNF3Q9BXJ4 246 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 ROGDIQ9GZN7 287 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 EPS8L2Q9H6S3 715 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PRTFDC1Q9NRG1 225 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PCTPQ9UKL6 214 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 SHANK1Q9Y566 2161 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 PCDHGA10Q9Y5H3 936 aa15.13■□□□□ 0.01
PDLIM5-212ENST00000509333 A8MUA0 341 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 FOXO6A8MYZ6 492 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 TGFBR3LH3BV60 316 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 GOLGA8RI6L899 631 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 CLDN4O14493 209 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 DLX3O60479 287 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 WDPCPO95876 746 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 PYGBP11216 843 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 HIST1H1TP22492 207 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 CERS1P27544 350 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 TNFSF10P50591 281 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 SLC26A5P58743 744 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 RPS13P62277 151 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 ESPL1Q14674 2120 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 TLR1Q15399 786 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 ZRSR2Q15696 482 aaKnown RBP15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 OR4C11Q6IEV9 310 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 MYLK4Q86YV6 388 aaPredicted RBP15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 SCUBE1Q8IWY4 988 aa15.12■□□□□ 0.01
PDLIM5-212ENST00000509333 ZNF595Q8IYB9 648 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms