RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 KCNAB2Q13303 367 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 RAPSNQ13702 412 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 GTF2H2Q13888 395 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 RUNX2Q13950 521 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FAM53BQ14153 422 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 NAA25Q14CX7 972 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 PCLAFQ15004 111 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TBCCQ15814 346 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FAM83EQ2M2I3 478 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 DEFB134Q4QY38 66 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 XKR6Q5GH73 641 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TNFAIP8L3Q5GJ75 292 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 YOD1Q5VVQ6 348 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 GRHL2Q6ISB3 625 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 GTF2H2CQ6P1K8 395 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 PRMT9Q6P2P2 845 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TMEM205Q6UW68 189 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TRABD2AQ86V40 505 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 APLFQ8IW19 511 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 LAS2Q8IYD9 372 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CAMKVQ8NCB2 501 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FDCSPQ8NFU4 85 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 OR7G3Q8NG95 312 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 OR11G2Q8NGC1 345 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 EDARADDQ8WWZ3 215 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 UCN3Q969E3 161 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 RERGQ96A58 199 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 PHF21BQ96EK2 531 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 MVB12AQ96EY5 273 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 MMABQ96EY8 250 aaPredicted RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 F2RL3Q96RI0 385 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 KCNA7Q96RP8 456 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 NPAS2Q99743 824 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 AIF1LQ9BQI0 150 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 CRB3Q9BUF7 120 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TRIM54Q9BYV2 358 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 MRPL46Q9H2W6 279 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 FARSBQ9NSD9 589 aaKnown RBP6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 MKS1Q9NXB0 559 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 P4HTMQ9NXG6 502 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 TRPC4Q9UBN4 977 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 KCND3Q9UK17 655 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 POLHQ9Y253 713 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC22A7Q9Y694 548 aa6.79□□□□□ -1.32
TOPBP1-207ENST00000509162 IGHV1-45A0A0A0MS14 117 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 CCDC189A1A4V9 331 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 LRIT2A6NDA9 550 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 IDSB3KWA1 339 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SHISA8B8ZZ34 492 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 H0YIG0 161 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SAP18O00422 153 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PLPP1O14494 284 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ERI3O43414 337 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 TMPRSS11DO60235 418 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PLIN3O60664 434 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 EEDO75530 441 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SERPIND1P05546 499 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 KLK3P07288 261 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SLC35G6P0C7Q6 338 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 COL6A2P12110 1019 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 GFAPP14136 432 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 CHN1P15882 459 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 AGXTP21549 392 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 MMP11P24347 488 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 HSD3B2P26439 372 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 XCR1P46094 333 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 NEK2P51955 445 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 HNRNPH2P55795 449 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 RPS15P62841 145 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 BTG2P78543 158 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 IRF8Q02556 426 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PLAURQ03405 335 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 RBBP5Q15291 538 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SPRED3Q2MJR0 410 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PRR30Q53SZ7 412 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 DCAF10Q5QP82 559 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ZNF678Q5SXM1 525 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 FAAH2Q6GMR7 532 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 ABHD17CQ6PCB6 329 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 EMBQ6PCB8 327 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 TMIGD1Q6UXZ0 262 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 C1orf229Q6ZS94 237 aaPredicted RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 CCDC91Q7Z6B0 441 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 SCUBE1Q8IWY4 988 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 MMP21Q8N119 569 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 L3MBTL4Q8NA19 623 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 Q8NA96 180 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 OR4F6Q8NGB9 312 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 OR51Q1Q8NH59 317 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 HUS1BQ8NHY5 278 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PSMF1Q92530 271 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 GAL3ST3Q96A11 431 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 MTBPQ96DY7 904 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PTCD3Q96EY7 689 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 WBP1Q96G27 269 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 PEX11GQ96HA9 241 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 HBEGFQ99075 208 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 C17orf62Q9BQA9 187 aa6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 MRPL57Q9BQC6 102 aaKnown RBP6.78□□□□□ -1.32
TOPBP1-207ENST00000509162 EFHD1Q9BUP0 239 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms