RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 CDCP1Q9H5V8 836 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 NT5DC2Q9H857 520 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 PNO1Q9NRX1 252 aaKnown RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 ABI3Q9P2A4 366 aa13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 PLEKHB1Q9UF11 243 aaPredicted RBP13.88□□□□□ -0.19
UBE2D3-228ENST00000508974 CROCCQ5TZA2 2017 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 A0A087X1B8 175 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 A0A096LPK6 155 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 IGKV3D-11A0A0A0MRZ8 115 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 TCRBV16S1A1N1A0A5B0 115 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SAGE2PA6NJ88 616 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 GABRR3A8MPY1 467 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 K7EPI3 171 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SAP18O00422 153 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 MYO1DO94832 1006 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 CTAGE8P0CG41 777 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 GFAPP14136 432 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 GSTM2P28161 218 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 TYK2P29597 1187 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 RAB38P57729 211 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 KCNK10P57789 538 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SLC13A2Q13183 592 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 DDX39BQ13838 428 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 FAM83EQ2M2I3 478 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF766Q5HY98 468 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 PAGE2BQ5JRK9 111 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SPINK14Q6IE38 97 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 CTAGE4Q8IX94 777 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 TEX9Q8N6V9 391 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 ARMC2Q8NEN0 867 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 THAP3Q8WTV1 239 aaPredicted RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 C5orf34Q96MH7 638 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 QRFPRQ96P65 431 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 CSF3RQ99062 836 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SLX1AQ9BQ83 275 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 UTP23Q9BRU9 249 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 ACSS3Q9H6R3 686 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 PRTFDC1Q9NRG1 225 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 CPSF2Q9P2I0 782 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 COPG2Q9UBF2 871 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SLC5A6Q9Y289 635 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 ANGPTL3Q9Y5C1 460 aa13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 SPTBN1Q01082 2364 aaKnown RBP13.87□□□□□ -0.19
UBE2D3-228ENST00000508974 A0A088AWK7 358 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 TGFBR3LH3BV60 316 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 RTCAO00442 366 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 TGFB1P01137 390 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ALDOAP04075 364 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF10P21506 573 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 CD96P40200 585 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 SERPINB8P50452 374 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 LAPTM5Q13571 262 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 OR1C1Q15619 314 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 INAQ16352 499 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 PFKFB4Q16877 469 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ADPRMQ3LIE5 342 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ABHD17CQ6PCB6 329 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 MNS1Q8NEH6 495 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ELP5Q8TE02 316 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 UBTD2Q8WUN7 234 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 NR4A3Q92570 626 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 WDR34Q96EX3 536 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 SERINC2Q96SA4 455 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 FMO2Q99518 471 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 PITHD1Q9GZP4 211 aaPredicted RBP13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 CLK4Q9HAZ1 481 aaKnown RBP13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF358Q9NW07 568 aa13.86□□□□□ -0.19
UBE2D3-228ENST00000508974 MAST4O15021 2626 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 TRBV11-1A0A0K0K1C0 115 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 SYCE1LA8MT33 242 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 POC1B-GALNT4F8VUJ3 575 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 LRRTM2O43300 516 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 KLHL2O95198 593 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 LDLRP01130 860 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 INHBAP08476 426 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MTHFD2P13995 350 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 EPB42P16452 691 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MST1P26927 711 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 TPP2P29144 1249 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 TDGF1P3P51864 188 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MTTPP55157 894 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 LIM2P55344 173 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF468Q5VIY5 522 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 C1QL3Q5VWW1 255 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MED27Q6P2C8 311 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 KLC3Q6P597 504 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 GFRALQ6UXV0 394 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 RPS19BP1Q86WX3 136 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 SCUBE1Q8IWY4 988 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 PLD6Q8N2A8 252 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MDS2Q8NDY4 140 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 ZNF473Q8WTR7 871 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 PAFAH2Q99487 392 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 SORBS1Q9BX66 1292 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 NPLQ9BXD5 320 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MS4A8Q9BY19 250 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 TSPAN10Q9H1Z9 355 aaPredicted RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 PRDM7Q9NQW5 492 aa13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MRPS33Q9Y291 106 aaKnown RBP13.85□□□□□ -0.19
UBE2D3-228ENST00000508974 MMACHCQ9Y4U1 282 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms