RNA–Protein interactions for RNA: ENST00000508952.5

PACRGL-220, Transcript of parkin coregulated like, humanhuman

TSL 1 (best)

Gene PACRGL, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRGL-220ENST00000508952 MMACHCQ9Y4U1 282 aa20.66■□□□□ 0.9
PACRGL-220ENST00000508952 TGFBR3LH3BV60 316 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 UBXN8O00124 270 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 ZG16O60844 167 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 LTA4HP09960 611 aaKnown RBP20.65■□□□□ 0.9
PACRGL-220ENST00000508952 CERS1P27544 350 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 TPP2P29144 1249 aaPredicted RBP20.65■□□□□ 0.9
PACRGL-220ENST00000508952 CRABP2P29373 138 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 RAB38P57729 211 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 IRF8Q02556 426 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 CKAP4Q07065 602 aaKnown RBP20.65■□□□□ 0.9
PACRGL-220ENST00000508952 CHIT1Q13231 466 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 BMPR2Q13873 1038 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 ZNF787Q6DD87 383 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 TRIM40Q6P9F5 258 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 ABHD17CQ6PCB6 329 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 LRRC70Q7Z2Q7 622 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 SCUBE1Q8IWY4 988 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 LGI4Q8N135 537 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 SCMH1Q96GD3 660 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 C16orf45Q96MC5 204 aaPredicted RBP20.65■□□□□ 0.9
PACRGL-220ENST00000508952 F2RL3Q96RI0 385 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 ATOH8Q96SQ7 321 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 EFCAB11Q9BUY7 163 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 SEC14L3Q9UDX4 400 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 PCDHGB6Q9Y5F9 930 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 NOTCH2Q04721 2471 aa20.65■□□□□ 0.9
PACRGL-220ENST00000508952 ITPR2Q14571 2701 aa20.64■□□□□ 0.9
PACRGL-220ENST00000508952 A0A088AWK7 358 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 NEURL1O76050 574 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 MYO1DO94832 1006 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 CD46P15529 392 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 ZNF10P21506 573 aaPredicted RBP20.64■□□□□ 0.89
PACRGL-220ENST00000508952 EEF1DP29692 281 aaKnown RBP20.64■□□□□ 0.89
PACRGL-220ENST00000508952 PPP2R1BP30154 601 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 IRF9Q00978 393 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 SLC13A2Q13183 592 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 UBAP2Q5T6F2 1119 aaKnown RBP20.64■□□□□ 0.89
PACRGL-220ENST00000508952 MYO7BQ6PIF6 2116 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 KCTD4Q8WVF5 259 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 NXNL1Q96CM4 212 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 CSF3RQ99062 836 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 PRTFDC1Q9NRG1 225 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 PNO1Q9NRX1 252 aaKnown RBP20.64■□□□□ 0.89
PACRGL-220ENST00000508952 LRFN1Q9P244 771 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 CLDN16Q9Y5I7 305 aa20.64■□□□□ 0.89
PACRGL-220ENST00000508952 A0A1B0GUH1 482 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 KERAO60938 352 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 MSH2P43246 934 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 MTTPP55157 894 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 LIM2P55344 173 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 MLF1P58340 268 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 LAPTM5Q13571 262 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 PAGE2BQ5JRK9 111 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 MROH9Q5TGP6 573 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 GALNTL5Q7Z4T8 443 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 CLNKQ7Z7G1 428 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 CENPLQ8N0S6 344 aaPredicted RBP20.63■□□□□ 0.89
PACRGL-220ENST00000508952 TMEM178AQ8NBL3 297 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 THAP3Q8WTV1 239 aaPredicted RBP20.63■□□□□ 0.89
PACRGL-220ENST00000508952 SERINC2Q96SA4 455 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 DEFB126Q9BYW3 111 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 TSPAN10Q9H1Z9 355 aaPredicted RBP20.63■□□□□ 0.89
PACRGL-220ENST00000508952 COPS7BQ9H9Q2 264 aaPredicted RBP20.63■□□□□ 0.89
PACRGL-220ENST00000508952 PRM3Q9NNZ6 103 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 ACOT9Q9Y305 439 aa20.63■□□□□ 0.89
PACRGL-220ENST00000508952 TRBV11-1A0A0K0K1C0 115 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 HMX2A2RU54 273 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 SH3BGRLO75368 114 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 URI1O94763 535 aaPredicted RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 SP1P08047 785 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 HPDP32754 393 aaPredicted RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 DCTP40126 519 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 HSD17B7P56937 341 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 ZRSR2Q15696 482 aaKnown RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 TBCCQ15814 346 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 UAP1Q16222 522 aaPredicted RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 HIST2H2ACQ16777 129 aaPredicted RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 HIST2H2AA3Q6FI13 130 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 UBE3DQ7Z6J8 389 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 APCDD1LQ8NCL9 501 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 B3GNT7Q8NFL0 401 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 ADAMTS18Q8TE60 1221 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 UBTD2Q8WUN7 234 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 RELTQ969Z4 430 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 PRDM7Q9NQW5 492 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 OPTCQ9UBM4 332 aa20.62■□□□□ 0.89
PACRGL-220ENST00000508952 MRPS33Q9Y291 106 aaKnown RBP20.62■□□□□ 0.89
PACRGL-220ENST00000508952 TRGV8A0A0C4DH27 118 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 MYOCOSA0A1B0GUC4 107 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 K7EPI3 171 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 CYR61O00622 381 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 CLDN4O14493 209 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 SLC25A12O75746 678 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 C2P06681 752 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 PCNAP12004 261 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 CASP2P42575 452 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 TGM3Q08188 693 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 E2F2Q14209 437 aa20.61■□□□□ 0.89
PACRGL-220ENST00000508952 MAPKAPK3Q16644 382 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms