RNA–Protein interactions for RNA: ENST00000507845.5

UBE2D3-221, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4 BASIC

Gene UBE2D3, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-221ENST00000507845 COL26A1Q96A83 441 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 FKBP10Q96AY3 582 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 SERINC2Q96SA4 455 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 NPLQ9BXD5 320 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 ROGDIQ9GZN7 287 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 DDX31Q9H8H2 851 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 COPS7BQ9H9Q2 264 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 CLK4Q9HAZ1 481 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 AHSPQ9NZD4 102 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 HCN3Q9P1Z3 774 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 IFT80Q9P2H3 777 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 MARCOQ9UEW3 520 aaPredicted RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 URB1O60287 2271 aaKnown RBP12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 CROCCQ5TZA2 2017 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 ASPMQ8IZT6 3477 aa12.74□□□□□ -0.37
UBE2D3-221ENST00000507845 IGLV3-12A0A075B6K2 115 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 A0A0A6YYD5 115 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 LOC101059948A0A1B0GTJ6 334 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 TCP11X1B4DZS4 312 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 C9J4A7 227 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 NPIPB8E9PQR5 432 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CHST10O43529 356 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 RGS14O43566 566 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 B3GALT2O43825 422 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CNOT3O75175 753 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 RSL1D1O76021 490 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 KITP10721 976 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 PRPH2P23942 346 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CLN3Q13286 438 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 RUNX2Q13950 521 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 NCF4Q15080 339 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 MRPL14Q6P1L8 145 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 FAM47EQ6ZV65 393 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 COMMD6Q7Z4G1 85 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 NUDT13Q86X67 352 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CA13Q8N1Q1 262 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 ZCCHC7Q8N3Z6 543 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 C1orf52Q8N6N3 182 aaKnown RBP12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 IL22RA1Q8N6P7 574 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 ZNF248Q8NDW4 579 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 C19orf60Q96EN9 201 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 APIPQ96GX9 242 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 C3orf30Q96M34 536 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CCT7Q99832 543 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 SLC26A1Q9H2B4 701 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CCDC134Q9H6E4 229 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 TRPC4Q9UBN4 977 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CTSFQ9UBX1 484 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 ADAM29Q9UKF5 820 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 CROTQ9UKG9 612 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 MAP4K5Q9Y4K4 846 aa12.73□□□□□ -0.37
UBE2D3-221ENST00000507845 ANKRD11Q6UB99 2663 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 DMXL2Q8TDJ6 3036 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 C3orf80F5H4A9 247 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 LSM1O15116 133 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 HDAC3O15379 428 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ALBP02768 609 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 RAB40ALP0C0E4 278 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 TCN2P20062 427 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 F8A1P23610 371 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 TPP2P29144 1249 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 DLSTP36957 453 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 HK2P52789 917 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 RAE1P78406 368 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ACSM2AQ08AH3 577 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 DNASE1L3Q13609 305 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 NR6A1Q15406 480 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 SPIN4Q56A73 249 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 SPDYAQ5MJ70 313 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 MLIPQ5VWP3 458 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ACSM2BQ68CK6 577 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 MRM1Q6IN84 353 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 PAGE2Q7Z2X7 111 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 LAPTM4BQ86VI4 370 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 PACS2Q86VP3 889 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 WDR75Q8IWA0 830 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ZC3H7AQ8IWR0 971 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ANKK1Q8NFD2 765 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 OR51Q1Q8NH59 317 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 PIWIL2Q8TC59 973 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 KCNE4Q8WWG9 221 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 C11orf24Q96F05 449 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 NAF1Q96HR8 494 aaKnown RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 YIPF2Q9BWQ6 316 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 NUF2Q9BZD4 464 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 LRTM1Q9HBL6 345 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 LYRM4Q9HD34 91 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 MKKSQ9NPJ1 570 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 PFDN4Q9NQP4 134 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 SIRT5Q9NXA8 310 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 KCMF1Q9P0J7 381 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ZNF282Q9UDV7 671 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 VTI1BQ9UEU0 232 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 GIMAP2Q9UG22 337 aa12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 GPN3Q9UHW5 284 aaPredicted RBP12.72□□□□□ -0.37
UBE2D3-221ENST00000507845 ATP6AP2A0A1C7CYW4 349 aa12.71□□□□□ -0.37
UBE2D3-221ENST00000507845 VSTM2BA6NLU5 285 aa12.71□□□□□ -0.37
UBE2D3-221ENST00000507845 C21orf140B9A014 251 aa12.71□□□□□ -0.37
UBE2D3-221ENST00000507845 SLCO1B7G3V0H7 640 aa12.71□□□□□ -0.37
UBE2D3-221ENST00000507845 ZNF195O14628 629 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms