RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 KITP10721 976 aa19■□□□□ 0.63
USP53-203ENST00000507597 DLSTP36957 453 aa19■□□□□ 0.63
USP53-203ENST00000507597 BTKQ06187 659 aa19■□□□□ 0.63
USP53-203ENST00000507597 SLAMF1Q13291 335 aa19■□□□□ 0.63
USP53-203ENST00000507597 NCF4Q15080 339 aa19■□□□□ 0.63
USP53-203ENST00000507597 PDCD2Q16342 344 aaPredicted RBP19■□□□□ 0.63
USP53-203ENST00000507597 BROXQ5VW32 411 aa19■□□□□ 0.63
USP53-203ENST00000507597 CES4AQ5XG92 561 aa19■□□□□ 0.63
USP53-203ENST00000507597 UNQ6494/PRO21346Q6UXR6 183 aa19■□□□□ 0.63
USP53-203ENST00000507597 TUBGCP3Q96CW5 907 aa19■□□□□ 0.63
USP53-203ENST00000507597 TGIF2Q9GZN2 237 aa19■□□□□ 0.63
USP53-203ENST00000507597 SIRT5Q9NXA8 310 aa19■□□□□ 0.63
USP53-203ENST00000507597 MCM8Q9UJA3 840 aa19■□□□□ 0.63
USP53-203ENST00000507597 A0A0G2JN53 185 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 TEX51A0A1B0GUA7 166 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 CHST10O43529 356 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 ETHE1O95571 254 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 IGHEP01854 428 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 KLK1P06870 262 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 VIMP08670 466 aaKnown RBP18.99■□□□□ 0.63
USP53-203ENST00000507597 TROVE2P10155 538 aaKnown RBP eCLIP18.99■□□□□ 0.63
USP53-203ENST00000507597 DDX5P17844 614 aaKnown RBP18.99■□□□□ 0.63
USP53-203ENST00000507597 BSGP35613 385 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 MAPK12P53778 367 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 RAB38P57729 211 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 MC1RQ01726 317 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 GUCY1A3Q02108 690 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 TBL3Q12788 808 aaKnown RBP18.99■□□□□ 0.63
USP53-203ENST00000507597 DNASE1L3Q13609 305 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 COMMD6Q7Z4G1 85 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 UBE3DQ7Z6J8 389 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 FAM9CQ8IZT9 166 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 C1orf52Q8N6N3 182 aaKnown RBP18.99■□□□□ 0.63
USP53-203ENST00000507597 ZSCAN1Q8NBB4 408 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 CT55Q8WUE5 264 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 FAIM2Q9BWQ8 316 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 CROTQ9UKG9 612 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 DAPP1Q9UN19 280 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 PCDHGA6Q9Y5G7 932 aa18.99■□□□□ 0.63
USP53-203ENST00000507597 IGLV3-12A0A075B6K2 115 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 GNG14A0A1W2PPG7 69 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 RTCAO00442 366 aaKnown RBP18.98■□□□□ 0.63
USP53-203ENST00000507597 MED26O95402 600 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 FAM58BPP0C7Q3 252 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 CERS1P27544 350 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 PTPN4P29074 926 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 PPP2R1BP30154 601 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 FOLR3P41439 243 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 XCR1P46094 333 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 BIKQ13323 160 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 MRPL14Q6P1L8 145 aaKnown RBP18.98■□□□□ 0.63
USP53-203ENST00000507597 GALNT18Q6P9A2 607 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 FAM199XQ6PEV8 388 aaPredicted RBP18.98■□□□□ 0.63
USP53-203ENST00000507597 Q6ZSR9 355 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 FAM47EQ6ZV65 393 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 PRSS41Q7RTY9 318 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 GPR180Q86V85 440 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 PDSS2Q86YH6 399 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 STT3BQ8TCJ2 826 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 NACC2Q96BF6 587 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 TBC1D20Q96BZ9 403 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 AICDAQ9GZX7 198 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 TUBB1Q9H4B7 451 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 MEAF6Q9HAF1 191 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 HCN3Q9P1Z3 774 aa18.98■□□□□ 0.63
USP53-203ENST00000507597 MARCOQ9UEW3 520 aaPredicted RBP18.98■□□□□ 0.63
USP53-203ENST00000507597 EIF3LQ9Y262 564 aaKnown RBP18.98■□□□□ 0.63
USP53-203ENST00000507597 ZNF860A6NHJ4 632 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 PCDH7O60245 1069 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 EDF1O60869 148 aaKnown RBP18.97■□□□□ 0.63
USP53-203ENST00000507597 RECKO95980 971 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ZGLP1P0C6A0 271 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ACPPP15309 386 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 CPN2P22792 545 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 LIM2P55344 173 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 NKG7Q16617 165 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 GALNTL6Q49A17 601 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 XKR7Q5GH72 579 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 MFSD4BQ5TF39 518 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ATG14Q6ZNE5 492 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ACAD11Q709F0 780 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 MED25Q71SY5 747 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ZNF595Q8IYB9 648 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 CA13Q8N1Q1 262 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 EFCAB3Q8N7B9 438 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 AMER3Q8N944 861 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.97■□□□□ 0.63
USP53-203ENST00000507597 APIPQ96GX9 242 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 PEX11GQ96HA9 241 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 TRIM55Q9BYV6 548 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 NUF2Q9BZD4 464 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 SLCO1B3Q9NPD5 702 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 PRDM9Q9NQV7 894 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 FBXW2Q9UKT8 454 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 PSME2Q9UL46 239 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 MAPRE3Q9UPY8 281 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 USH1CQ9Y6N9 552 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 SPTBN2O15020 2390 aa18.97■□□□□ 0.63
USP53-203ENST00000507597 A0A0A6YYD5 115 aa18.96■□□□□ 0.63
USP53-203ENST00000507597 LOC101059948A0A1B0GTJ6 334 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms