RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 TRPV3Q8NET8 790 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 OR13C5Q8NGS8 318 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 RPLP0P6Q8NHW5 317 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 SPATA18Q8TC71 538 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 NR4A3Q92570 626 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 HAS2Q92819 552 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 NSMCE3Q96MG7 304 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 SPATA13Q96N96 652 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 USP28Q96RU2 1077 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 PAPOLGQ9BWT3 736 aaKnown RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 LRRC2Q9BYS8 371 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 NAPBQ9H115 298 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 MTHFD2LQ9H903 347 aaPredicted RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 KCNMB3Q9NPA1 279 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 PRMT8Q9NR22 394 aaPredicted RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 FAM212BQ9NTI7 297 aaPredicted RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 AKAP7Q9P0M2 348 aaPredicted RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 EXOGQ9Y2C4 368 aaKnown RBP2.91□□□□□ -1.94
LSM6-205ENST00000507449 KNSTRNQ9Y448 316 aa2.91□□□□□ -1.94
LSM6-205ENST00000507449 DHX29Q7Z478 1369 aaKnown RBP2.9□□□□□ -1.94
LSM6-205ENST00000507449 TLR4O00206 839 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 B4GAT1O43505 415 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 EPOP01588 193 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 RPLP0P05388 317 aaKnown RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 ABHD2P08910 425 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 P4HA1P13674 534 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 UGT1A6P19224 532 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 HLA-DPA1P20036 260 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 PDHA2P29803 388 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 GPR183P32249 361 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CLK1P49759 484 aaKnown RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 HILS1P60008 231 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CYCSP99999 105 aaKnown RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 MFGE8Q08431 387 aaPredicted RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 LCP2Q13094 533 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CBX3Q13185 183 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 SPHARQ15513 63 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 MRGPRG-AS1Q2M3A8 158 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 C14orf177Q52M58 125 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 ZC2HC1BQ5TFG8 222 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 LYPLAL1Q5VWZ2 237 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 BSPRYQ5W0U4 402 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 C1orf186Q6ZWK4 172 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CYP4V2Q6ZWL3 525 aaPredicted RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 RABEPKQ7Z6M1 372 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 NLRP14Q86W24 1093 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CACUL1Q86Y37 369 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 KRTAP7-1Q8IUC3 87 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 WDR49Q8IV35 697 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 RTL3Q8N8U3 475 aaKnown RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 WDSUB1Q8N9V3 476 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 SIDT2Q8NBJ9 832 aaKnown RBP2.9□□□□□ -1.95
LSM6-205ENST00000507449 AQP11Q8NBQ7 271 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 OR9Q2Q8NGE9 314 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 OR5M9Q8NGP3 310 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 CHURC1Q8WUH1 139 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 ATP6V0A1Q93050 837 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 ULK4Q96C45 1275 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 DTD2Q96FN9 168 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 POM121L2Q96KW2 1035 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 GUCD1Q96NT3 240 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 ERGIC2Q96RQ1 377 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 SSX3Q99909 188 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 UBAC1Q9BSL1 405 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 DPEP3Q9H4B8 488 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 MED20Q9H944 212 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 C3orf14Q9HBI5 128 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 FETUBQ9UGM5 382 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 LNPEPQ9UIQ6 1025 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 WIPI2Q9Y4P8 454 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 OR1A2Q9Y585 309 aa2.9□□□□□ -1.95
LSM6-205ENST00000507449 IGHV3-38A0A0C4DH36 116 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 KRT86O43790 486 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 BCAS2O75934 225 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 CPNE6O95741 557 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 FGF19O95750 216 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 THEGLP0DJG4 465 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CPA3P15088 417 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 ANPEPP15144 967 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CYP3A5P20815 502 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 GLRA1P23415 457 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 GIFP27352 417 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CCR4P51679 360 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 DHODHQ02127 395 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 GABPAQ06546 454 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CALCOCO2Q13137 446 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 GIT2Q14161 759 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 KRT81Q14533 505 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 NECTIN1Q15223 517 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CDC37Q16543 378 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 STX1AQ16623 288 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 WLSQ5T9L3 541 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CAPN13Q6MZZ7 669 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 NEPROQ6NW34 567 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 TATDN1Q6P1N9 297 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 CD164L2Q6UWJ8 174 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 Q71RC1 249 aaPredicted RBP2.89□□□□□ -1.95
LSM6-205ENST00000507449 CHMP1BQ7LBR1 199 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 ZER1Q7Z7L7 766 aa2.89□□□□□ -1.95
LSM6-205ENST00000507449 PEX5LQ8IYB4 626 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms