RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 G6PDP11413 515 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ACPPP15309 386 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ALAS2P22557 587 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 OR1D4P47884 311 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 HNRNPH2P55795 449 aaKnown RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 RAB15P59190 212 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 MAD2L1Q13257 205 aaPredicted RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 SDK2Q58EX2 2172 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 DCAF12Q5T6F0 453 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 GKAP1Q5VSY0 366 aaPredicted RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 NUP210LQ5VU65 1888 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 C1orf189Q5VU69 101 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ZNF385CQ66K41 422 aaPredicted RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 CA13Q8N1Q1 262 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 CLHC1Q8NHS4 586 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 C16orf78Q8WTQ4 265 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 MMABQ96EY8 250 aaPredicted RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 EGLN2Q96KS0 407 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 TSSK3Q96PN8 268 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 MAPKAP1Q9BPZ7 522 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 DDA1Q9BW61 102 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ROGDIQ9GZN7 287 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 ZNF385DQ9H6B1 395 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 TXLNGQ9NUQ3 528 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 HEY2Q9UBP5 337 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 BAIAP2L1Q9UHR4 511 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 EIF3LQ9Y262 564 aaKnown RBP13.43□□□□□ -0.26
RNF4-208ENST00000507247 ARL2BPQ9Y2Y0 163 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 GPR45Q9Y5Y3 372 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 MAU2Q9Y6X3 613 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 NCOR2Q9Y618 2525 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 SPTBN2O15020 2390 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 KNTC1P50748 2209 aa13.43□□□□□ -0.26
RNF4-208ENST00000507247 A0A088AWK7 358 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 GNG14A0A1W2PPG7 69 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 ANKRD28O15084 1053 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 B3GALT2O43825 422 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CPNE3O75131 537 aaKnown RBP13.42□□□□□ -0.26
RNF4-208ENST00000507247 FAM58BPP0C7Q3 252 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 ATXN8OSP0DMR3 200 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 PRPS2P11908 318 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 ZNF10P21506 573 aaPredicted RBP13.42□□□□□ -0.26
RNF4-208ENST00000507247 MAPK1P28482 360 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 RORAP35398 523 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 AVPR1BP47901 424 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 MAPK12P53778 367 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 LIM2P55344 173 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 GABREP78334 506 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 MAT1AQ00266 395 aaKnown RBP13.42□□□□□ -0.26
RNF4-208ENST00000507247 ZNF763Q0D2J5 394 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 SLAMF1Q13291 335 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 PTGR1Q14914 329 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 SYT16Q17RD7 645 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CYP20A1Q6UW02 462 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 MMP21Q8N119 569 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CCDC197Q8NCU1 140 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CDC26Q8NHZ8 85 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.42□□□□□ -0.26
RNF4-208ENST00000507247 TM4SF18Q96CE8 201 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CLIP3Q96DZ5 547 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 MVB12AQ96EY5 273 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CNTNAP3BQ96NU0 1288 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 GBP5Q96PP8 586 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 CNTNAP3Q9BZ76 1288 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 BRINP2Q9C0B6 783 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 SLC7A5P2Q9GIP4 190 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 ACTL8Q9H568 366 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 TEX10Q9NXF1 929 aaPredicted RBP13.42□□□□□ -0.26
RNF4-208ENST00000507247 KCMF1Q9P0J7 381 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 FOXJ2Q9P0K8 574 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 HCN3Q9P1Z3 774 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 FBXW2Q9UKT8 454 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 DAPP1Q9UN19 280 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 ASB4Q9Y574 426 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 PCDHGA8Q9Y5G5 932 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 PCDHGA3Q9Y5H0 932 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 COPG1Q9Y678 874 aaKnown RBP13.42□□□□□ -0.26
RNF4-208ENST00000507247 CCDC88CQ9P219 2028 aa13.42□□□□□ -0.26
RNF4-208ENST00000507247 TEX51A0A1B0GUA7 166 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 ARHGAP10A1A4S6 786 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 H0YIG0 161 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 CHST10O43529 356 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 PRKRAO75569 313 aaKnown RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 TNFSF15O95150 251 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 ADRB1P08588 477 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 IL3P08700 152 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 HBQ1P09105 142 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 IDO1P14902 403 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 NCF2P19878 526 aaPredicted RBP13.41□□□□□ -0.26
RNF4-208ENST00000507247 NME5P56597 212 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 TAS2R50P59544 299 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 SLC9A5Q14940 896 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 GSTA3Q16772 222 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 METTL21CQ5VZV1 264 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 COX15Q7KZN9 410 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 CLNKQ7Z7G1 428 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 EFCAB3Q8N7B9 438 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 PROKR1Q8TCW9 393 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 NUDT8Q8WV74 236 aa13.41□□□□□ -0.26
RNF4-208ENST00000507247 UCN3Q969E3 161 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms