RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 EEF1GP26641 437 aaKnown RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 GDF1P27539 372 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 LOXP28300 417 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 VLDLRP98155 873 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 CRYZQ08257 329 aaKnown RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 FAPQ12884 760 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 BMPR2Q13873 1038 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 RCAN2Q14206 197 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 SPARCL1Q14515 664 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 ITIH4Q14624 930 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 KRT31Q15323 416 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 TMED2Q15363 201 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 CT47A1Q5JQC4 288 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 THEMIS2Q5TEJ8 643 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 PRAMEF20Q5VT98 475 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 SLC22A10Q63ZE4 541 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 TMEM214Q6NUQ4 689 aaKnown RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 RANBP10Q6VN20 620 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 PACS1Q6VY07 963 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 SH2D5Q6ZV89 423 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 ZNF571Q7Z3V5 609 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 VN1R4Q7Z5H5 301 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 GCNT2Q8N0V5 402 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 RFLNBQ8N5W9 214 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 CAMKVQ8NCB2 501 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 PPFIBP2Q8ND30 876 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 LKAAEAR1Q8TD35 194 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 MAGEC3Q8TD91 643 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 AKAP1Q92667 903 aaKnown RBP eCLIP6.6□□□□□ -1.35
VCAN-207ENST00000507162 MARK4Q96L34 752 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 OLFM3Q96PB7 478 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 TSSK1BQ9BXA7 367 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 ZNF703Q9H7S9 590 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 ZFP64Q9NPA5 681 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 HOMER3Q9NSC5 361 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 NLE1Q9NVX2 485 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 SPATA7Q9P0W8 599 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 GDF2Q9UK05 429 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 BOKQ9UMX3 212 aaPredicted RBP6.6□□□□□ -1.35
VCAN-207ENST00000507162 LIPT1Q9Y234 373 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 MRFAP1Q9Y605 127 aa6.6□□□□□ -1.35
VCAN-207ENST00000507162 PRR14LQ5THK1 2151 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 KMT2CQ8NEZ4 4911 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 TCRBV16S1A1N1A0A5B0 115 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 SLC35F4A4IF30 521 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 C16orf97H3BN30 126 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 OVOL3O00110 214 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 PSMD12O00232 456 aaPredicted RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 RCBTB2O95199 551 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 CYP4B1P13584 511 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 MSNP26038 577 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 AOAHP28039 575 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 CD79BP40259 229 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 CCNFP41002 786 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 SLCO1A2P46721 670 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 RELAQ04206 551 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 UBXN1Q04323 297 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 SRYQ05066 204 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 MSLNQ13421 630 aaPredicted RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 TOMM20Q15388 145 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 PRR31Q5SQ13 230 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 SLC9A4Q6AI14 798 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 ALKBH2Q6NS38 261 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 QSOX2Q6ZRP7 698 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 C22orf34Q6ZV56 151 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 BZW1Q7L1Q6 419 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 ZC3HAV1Q7Z2W4 902 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 CCDC50Q8IVM0 306 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 GOLM1Q8NBJ4 401 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 OR9A1PQ8NGU1 263 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 SLC13A3Q8WWT9 602 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 ABTB1Q969K4 478 aaPredicted RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 WDYHV1Q96HA8 205 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 KRT12Q99456 494 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 TTC1Q99614 292 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 EBNA1BP2Q99848 306 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 CARD6Q9BX69 1037 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 ISCUQ9H1K1 167 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 PRDM9Q9NQV7 894 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 EIF2B3Q9NR50 452 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 ZFATQ9P243 1243 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 PACSIN3Q9UKS6 424 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 INTUQ9ULD6 942 aa6.59□□□□□ -1.35
VCAN-207ENST00000507162 R3HDM2Q9Y2K5 976 aaKnown RBP6.59□□□□□ -1.35
VCAN-207ENST00000507162 LOC100289279A0A1B0GTE1 492 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 MYOCOSA0A1B0GUC4 107 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 C3orf70A6NLC5 250 aaPredicted RBP6.58□□□□□ -1.36
VCAN-207ENST00000507162 H7C0S8 307 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 SMAPO00193 183 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 MSTNO14793 375 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 KPNA5O15131 536 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 KLF4O43474 513 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 KIF5CO60282 957 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 AVILO75366 819 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 LRATO95237 230 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 SERPIND1P05546 499 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 SOD3P08294 240 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 IGHV4-31P0DP07 118 aa6.58□□□□□ -1.36
VCAN-207ENST00000507162 SKILP12757 684 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms