RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 FAM111AQ96PZ2 611 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 BTBD9Q96Q07 612 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 CDCA3Q99618 268 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PRMT1Q99873 361 aaKnown RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 DDX50Q9BQ39 737 aaKnown RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 PSD2Q9BQI7 771 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 RHNO1Q9BSD3 238 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ALKBH7Q9BT30 221 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 C1QTNF4Q9BXJ3 329 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 KRT23Q9C075 422 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 SLC39A8Q9C0K1 460 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 HSD3B7Q9H2F3 369 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 C6orf106Q9H6K1 298 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZCCHC3Q9NUD5 404 aaKnown RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAM118AQ9NWS6 357 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 RNF7Q9UBF6 113 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 C19orf25Q9UFG5 118 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 UBQLN2Q9UHD9 624 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 KCNJ14Q9UNX9 436 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 TNNQ9UQP3 1299 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 KCNK6Q9Y257 313 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 FOXA2Q9Y261 457 aaPredicted RBP2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 RIPK3Q9Y572 518 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 R4GN57 208 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 RNF123Q5XPI4 1314 aa2.93□□□□□ -1.94
TRAPPC11-205ENST00000506426 COL4A5P29400 1685 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TNRC6CQ9HCJ0 1690 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMEM129A0AVI4 362 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 PLSCR5A0PG75 271 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GLTPD2A6NH11 291 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 C2CD4DB7Z1M9 353 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 E5RGE8 158 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCL24O00175 119 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ATP6V0E1O15342 81 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GRAP2O75791 330 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 PPP1R3DO95685 299 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 BAG3O95817 575 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 YES1P07947 543 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CD59P13987 128 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 DARSP14868 501 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ETS1P14921 441 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 LIFP15018 202 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF18P17022 549 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GOT1P17174 413 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCNA2P20248 432 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 DGKAP23743 735 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 DUTP33316 252 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NR0B1P51843 470 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GAS1P54826 345 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CLDN17P56750 224 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 LINC00205P59089 165 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 FKBP1BP68106 108 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 RPP38P78345 283 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 MYL7Q01449 175 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GCNT1Q02742 428 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 SLC3A1Q07837 685 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 INAQ16352 499 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GPR33Q49SQ1 333 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CCDC40Q4G0X9 1142 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF542PQ5EBM4 170 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 XKR3Q5GH77 459 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 LCN1P1Q5VSP4 162 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 UGT3A1Q6NUS8 523 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ZNF790Q6PG37 636 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CD164L2Q6UWJ8 174 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 B3GLCTQ6Y288 498 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 SIGLEC15Q6ZMC9 328 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 FOXL2NBQ6ZUU3 175 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 MARK2Q7KZI7 788 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 G2E3Q7L622 706 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ADCK1Q86TW2 530 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NFE4Q86UQ8 179 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NBPF5PQ86XG9 351 aaPredicted RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NAGSQ8N159 534 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 FBXW8Q8N3Y1 598 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 KLHDC1Q8N7A1 406 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 POC1AQ8NBT0 407 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CNNM3Q8NE01 707 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 OR7A2PQ8NGA2 310 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 NUDCD2Q8WVJ2 157 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 PIK3R3Q92569 461 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 GGHQ92820 318 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CD101Q93033 1021 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 FAM46BQ96A09 425 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 RFT1Q96AA3 541 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMEM143Q96AN5 459 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMEM186Q96B77 213 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 ULK4Q96C45 1275 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 RBM41Q96IZ5 413 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 SPATA13Q96N96 652 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 THUMPD2Q9BTF0 503 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 DDX47Q9H0S4 455 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TMEM245Q9H330 911 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 TFB2MQ9H5Q4 396 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 RAVER2Q9HCJ3 691 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 CD93Q9NPY3 652 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 PPANQ9NQ55 473 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 INTS10Q9NVR2 710 aaKnown RBP2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 DONSONQ9NYP3 566 aa2.92□□□□□ -1.94
TRAPPC11-205ENST00000506426 MIS18AQ9NYP9 233 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms