RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 YWHAZP63104 245 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 TNNC1P63316 161 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 POU5F1Q01860 360 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 MBTD1Q05BQ5 628 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 LAMTOR4Q0VGL1 99 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 DNAJC3Q13217 504 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 CUL1Q13616 776 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 TFDP1Q14186 410 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 EMC2Q15006 297 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 CCDC40Q4G0X9 1142 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 ANKRD20A8PQ5CZ79 823 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 XKR3Q5GH77 459 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 CBWD5Q5RIA9 395 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 HYIQ5T013 277 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 FHL5Q5TD97 284 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 ZNF280DQ6N043 979 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 BHLHB9Q6PI77 547 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 INO80CQ6PI98 192 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 ZCCHC9Q8N567 271 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 ARFGAP2Q8N6H7 521 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 ZNF713Q8N859 430 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 RNF149Q8NC42 400 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 APPL2Q8NEU8 664 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 PPHLN1Q8NEY8 458 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 TCP11Q8WWU5 503 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 PSPC1Q8WXF1 523 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 RAB40AQ8WXH6 277 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 CCT6BQ92526 530 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 RAPGEF5Q92565 580 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 RAD54LQ92698 747 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 P3H4Q92791 437 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 FBXL8Q96CD0 374 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 EEF2KMTQ96G04 330 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 CNDP2Q96KP4 475 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 FAM20AQ96MK3 541 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 ZMAT2Q96NC0 199 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 ZNF317Q96PQ6 595 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 RUFY1Q96T51 708 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 PSMB7Q99436 277 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 KRT12Q99456 494 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 RIT2Q99578 217 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 SEMA3CQ99985 751 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 STRA6Q9BX79 667 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 SLC25A18Q9H1K4 315 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 NXF3Q9H4D5 531 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 C6orf50Q9HD87 102 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 MMP25Q9NPA2 562 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 SIX2Q9NPC8 291 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 KLHL8Q9P2G9 620 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 CNOT8Q9UFF9 292 aaKnown RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 POLG2Q9UHN1 485 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 FBXL5Q9UKA1 691 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 TTC7AQ9ULT0 858 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 TBX20Q9UMR3 447 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 COL5A1P20908 1838 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 LRRK2Q5S007 2527 aa2.83□□□□□ -1.96
PROM1-203ENST00000502943 SETD2Q9BYW2 2564 aaPredicted RBP2.83□□□□□ -1.96
PROM1-203ENST00000502943 SPTBN1Q01082 2364 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 USP9YO00507 2555 aaPredicted RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 TDRD15B5MCY1 1934 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 MYH9P35579 1960 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 IGHV1OR15-9A0A0B4J2B8 117 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 CCDC189A1A4V9 331 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 FRMD3A2A2Y4 597 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 A6NL46 340 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 DUXAA6NLW8 204 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 CCT8L1PA6NM43 557 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 TMCO5BA8MYB1 307 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 F8VZ95 297 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 CCDC188H7C350 402 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 PGRMC1O00264 195 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 ACKR2O00590 384 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 CLIC2O15247 247 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 HCRTO43612 131 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 DFNA5O60443 496 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 DIAPH2O60879 1101 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 RTN2O75298 545 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 LYPLA2O95372 231 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 PRAMEF12O95522 483 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 GNA14O95837 355 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 GSTA1P08263 222 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 FAM106CPP0CH98 169 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 CYP11B2P19099 503 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 TYMPP19971 482 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 ANXA13P27216 316 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 GNA11P29992 359 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 YWHABP31946 246 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 TNFRSF4P43489 277 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 TUFMP49411 452 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 POLR2FP61218 127 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 ELF3P78545 371 aaPredicted RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 FKBP3Q00688 224 aaKnown RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 SETQ01105 290 aaPredicted RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 KLHL30Q0D2K2 578 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 IFT88Q13099 833 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 ILKQ13418 452 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 RIPK1Q13546 671 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 MXD4Q14582 209 aaPredicted RBP2.82□□□□□ -1.96
PROM1-203ENST00000502943 VEPH1Q14D04 833 aa2.82□□□□□ -1.96
PROM1-203ENST00000502943 RPS6KA1Q15418 735 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms