RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 FXYD6-FXYD2A0A087WZ82 144 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PRAMEF12O95522 483 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 EIF2DP41214 584 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 KHDRBS2Q5VWX1 349 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 FRRS1Q6ZNA5 592 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 LSM14AQ8ND56 463 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 RPLP0P6Q8NHW5 317 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PROKR1Q8TCW9 393 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 RPL3LQ92901 407 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 DPH2Q9BQC3 489 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 FXYD6Q9H0Q3 95 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 INSL6Q9Y581 213 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PPP6CO00743 305 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 KMOO15229 486 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 TEX28O15482 410 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 TGFB1P01137 390 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 ALPPP05187 535 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 HAPLN1P10915 354 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 UGT2B10P36537 528 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 GUCA1AP43080 201 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 CCR4P51679 360 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 GRB14Q14449 540 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 LETMD1Q6P1Q0 360 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 CFAP206Q8IYR0 622 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 SAMD12Q8N8I0 201 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 CCDC107Q8WV48 283 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 SUSD3Q96L08 255 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 SLC6A15Q9H2J7 730 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 ELAC1Q9H777 363 aaKnown RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 ANKRD36CQ5JPF3 1778 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 ABHD14A-ACY1A0A1B0GW23 586 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 URADA6NGE7 173 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 TRIM3O75382 744 aaPredicted RBP16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 EDN1P05305 212 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PHYKPLQ8IUZ5 450 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PSKH2Q96QS6 385 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 SIAEQ9HAT2 523 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 PCDHGB2Q9Y5G2 931 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 A3GALT2U3KPV4 340 aa16.58■□□□□ 0.24
HMGXB3-201ENST00000502717 FAM170BA6NMN3 283 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 SAP18O00422 153 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 TNFSF8P32971 234 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 PSMD8P48556 350 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 ARFIP1P53367 373 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 PSMA6P60900 246 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 RGS1Q08116 209 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 GPRIN1Q7Z2K8 1008 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 LYSMD2Q8IV50 215 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 GHDCQ8N2G8 530 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 UBXN10Q96LJ8 280 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 RHBGQ9H310 441 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 TCF7L1Q9HCS4 588 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 A0A1B0GUL6 1792 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 ANKRD34BA5PLL1 514 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 GABRB3P28472 473 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 GPM6BQ13491 265 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 POM121L1PQ3SYA9 428 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 LIPJQ5W064 366 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 HLA-DQA1Q5Y7H0 255 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 KCTD11Q693B1 232 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 NR4A3Q92570 626 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 HAVCR1Q96D42 359 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 SHDQ96IW2 340 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 MCCC1Q96RQ3 725 aaPredicted RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 REEP4Q9H6H4 257 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 PCDHGB7Q9Y5F8 929 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 IFNA6P05013 189 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 IDUAP35475 653 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF763Q0D2J5 394 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 ZNF234Q14588 700 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 FUNDC1Q8IVP5 155 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 ZBED3Q96IU2 234 aaPredicted RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 NEUROD4Q9HD90 331 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 WDR6Q9NNW5 1121 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 HSFX1Q9UBD0 423 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 WWP2O00308 870 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 TAS2R43P59537 309 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 KCNC3Q14003 757 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 SYT6Q5T7P8 510 aaPredicted RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 TAF8Q7Z7C8 310 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 COMMD7Q86VX2 200 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 BRINP2Q9C0B6 783 aa16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 RBM38Q9H0Z9 239 aaKnown RBP16.57■□□□□ 0.24
HMGXB3-201ENST00000502717 A0A0X1KG70 313 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 RFPL3O75679 317 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 RP2O75695 350 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 EOMESO95936 686 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 AP2S1P53680 142 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 VEZF1Q14119 521 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SWI5Q1ZZU3 235 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 PLAG1Q6DJT9 500 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 KDELC1Q6UW63 502 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 SLAMF8Q9P0V8 285 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 IKZF2Q9UKS7 526 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 MGAT4AQ9UM21 535 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 F2P00734 622 aa16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 CFL1P23528 166 aaKnown RBP16.56■□□□□ 0.24
HMGXB3-201ENST00000502717 NTRK2Q16620 822 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms