RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 SH3BGRLO75368 114 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 CYC1P08574 325 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 BGNP21810 368 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 CERS1P27544 350 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 BSGP35613 385 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 FOLR3P41439 243 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 SSR2P43308 183 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 XCR1P46094 333 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 RAP1GDS1P52306 607 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 FOXL2P58012 376 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 KLC1Q07866 573 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 VAC14Q08AM6 782 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 IL10RAQ13651 578 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 UGT8Q16880 541 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 AP5B1Q2VPB7 878 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 SGO1Q5FBB7 561 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 FAM69BQ5VUD6 431 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 CLEC6AQ6EIG7 209 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 OR4C11Q6IEV9 310 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 TRIM46Q7Z4K8 759 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 TMEM151BQ8IW70 566 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 CA13Q8N1Q1 262 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 ZCCHC7Q8N3Z6 543 aaKnown RBP13.39□□□□□ -0.27
RNF4-202ENST00000502316 ACOT4Q8N9L9 421 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 ZSCAN1Q8NBB4 408 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 MGARPQ8TDB4 240 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 HBEGFQ99075 208 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 PAIP2Q9BPZ3 127 aaKnown RBP13.39□□□□□ -0.27
RNF4-202ENST00000502316 ACPTQ9BZG2 426 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 DDX31Q9H8H2 851 aaKnown RBP13.39□□□□□ -0.27
RNF4-202ENST00000502316 COPS7BQ9H9Q2 264 aaPredicted RBP13.39□□□□□ -0.27
RNF4-202ENST00000502316 CPNE5Q9HCH3 593 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 HAO1Q9UJM8 370 aa13.39□□□□□ -0.27
RNF4-202ENST00000502316 NKX2-8O15522 239 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 CRCPO75575 148 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 FHP07954 510 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 ATXN8OSP0DMR3 200 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 RNH1P13489 461 aaKnown RBP13.38□□□□□ -0.27
RNF4-202ENST00000502316 SERPINB3P29508 390 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 ABCE1P61221 599 aaKnown RBP13.38□□□□□ -0.27
RNF4-202ENST00000502316 PPP2R2AP63151 447 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 OLR1P78380 273 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 TBL3Q12788 808 aaKnown RBP13.38□□□□□ -0.27
RNF4-202ENST00000502316 CDC20Q12834 499 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 RUNX2Q13950 521 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 SSPNQ14714 243 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 UGT3A2Q3SY77 523 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 LAPTM4BQ86VI4 370 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 NUDT13Q86X67 352 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 CLYBLQ8N0X4 340 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 METTL4Q8N3J2 472 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 ADAMTS18Q8TE60 1221 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 TBC1D20Q96BZ9 403 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 PEX11GQ96HA9 241 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 YIPF2Q9BWQ6 316 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 MRPL1Q9BYD6 325 aaKnown RBP13.38□□□□□ -0.27
RNF4-202ENST00000502316 C20orf27Q9GZN8 174 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 SOX17Q9H6I2 414 aaPredicted RBP13.38□□□□□ -0.27
RNF4-202ENST00000502316 LYRM4Q9HD34 91 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 PRM3Q9NNZ6 103 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 LANCL2Q9NS86 450 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 SEMA3GQ9NS98 782 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 NMRK1Q9NWW6 199 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 KCMF1Q9P0J7 381 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 VPS29Q9UBQ0 182 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 ADAM29Q9UKF5 820 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 DAPP1Q9UN19 280 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 SLC12A4Q9UP95 1085 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 TRAF6Q9Y4K3 522 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 DNAJC15Q9Y5T4 150 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 NUP210LQ5VU65 1888 aa13.38□□□□□ -0.27
RNF4-202ENST00000502316 CCDC88CQ9P219 2028 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 A0A0A6YYD5 115 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 IDSB3KWA1 339 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 TMEM233B4DJY2 109 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 NPIPB8E9PQR5 432 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 KLF11O14901 512 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 PCDH17O14917 1159 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 ITM2AO43736 263 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 JRKO75564 520 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 LYPLA1O75608 230 aaPredicted RBP13.37□□□□□ -0.27
RNF4-202ENST00000502316 HSPA4LO95757 839 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 FURINP09958 794 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 CHN1P15882 459 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 MMP11P24347 488 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 SLC1A6P48664 564 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 EFNA3P52797 238 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 LIM2P55344 173 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 RAB38P57729 211 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 BST1Q10588 318 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 STX3Q13277 289 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 ERV3-1Q14264 604 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 SH2D4BQ5SQS7 431 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 MRM1Q6IN84 353 aaKnown RBP13.37□□□□□ -0.27
RNF4-202ENST00000502316 SHISA6Q6ZSJ9 500 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 TRIM42Q8IWZ5 723 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 C11orf24Q96F05 449 aaPredicted RBP13.37□□□□□ -0.27
RNF4-202ENST00000502316 SORT1Q99523 831 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 CRB3Q9BUF7 120 aa13.37□□□□□ -0.27
RNF4-202ENST00000502316 SORBS1Q9BX66 1292 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms