RNA–Protein interactions for RNA: ENST00000498810.1

CDK11A-222, Transcript of cyclin dependent kinase 11A, human

TSL 2

Gene CDK11A, Length 574 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK11A-222	ENST00000498810	SERPINA7	P05543	415 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SERPINA6	P08185	405 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PRR35	P0CG20	571 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	RNH1	P13489	461 aa	Known RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SOX18	P35713	384 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	MSH2	P43246	934 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SLC6A12	P48065	614 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SERPINB9	P50453	376 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SOX8	P57073	446 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	OR4D2	P58180	307 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	TAS2R50	P59544	299 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PHEX	P78562	749 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZNF33B	Q06732	778 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	MFAP5	Q13361	173 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	LAPTM5	Q13571	262 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	NAA30	Q147X3	362 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	INPP5J	Q15735	1006 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	NSDHL	Q15738	373 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZXDC	Q2QGD7	858 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PRR30	Q53SZ7	412 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	CDKL4	Q5MAI5	379 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PDSS2	Q86YH6	399 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	IFT20	Q8IY31	132 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ARHGEF39	Q8N4T4	335 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ANKRD53	Q8N9V6	530 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	UHMK1	Q8TAS1	419 aa	Known RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	UBE2E3	Q969T4	207 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ESAM	Q96AP7	390 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	MIB2	Q96AX9	1013 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	TBC1D20	Q96BZ9	403 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PAFAH2	Q99487	392 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	LPAR4	Q99677	370 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	MESP1	Q9BRJ9	268 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	CENPK	Q9BS16	269 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	SARG	Q9BW04	601 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	PITHD1	Q9GZP4	211 aa	Predicted RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	ACSS3	Q9H6R3	686 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	KCNK13	Q9HB14	408 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	AGPAT4	Q9NRZ5	378 aa		10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810	MRPS33	Q9Y291	106 aa	Known RBP	10.05	□□□□□ -0.8
CDK11A-222	ENST00000498810		A8MUI8	341 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	CHST10	O43529	356 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	B3GALT2	O43825	422 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	B3GALT4	O96024	378 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	RHOXF2B	P0C7M4	288 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	MYBL2	P10244	700 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	CD97	P48960	835 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	RAP1GDS1	P52306	607 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	BTN3A2	P78410	334 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	IRF9	Q00978	393 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	CHIT1	Q13231	466 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	DDX39B	Q13838	428 aa	Known RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	RCN2	Q14257	317 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZNF169	Q14929	603 aa	Predicted RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	PCOLCE	Q15113	449 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	EXT1	Q16394	746 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	SFT2D3	Q587I9	215 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	PAPD4	Q6PIY7	484 aa	Known RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	FAM180A	Q6UWF9	173 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	IGFL3	Q6UXB1	125 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	ANKRD37	Q7Z713	158 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	CISD2	Q8N5K1	135 aa	Known RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	GALNT11	Q8NCW6	608 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	UTP15	Q8TED0	518 aa	Known RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	NXNL1	Q96CM4	212 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	UBXN10	Q96LJ8	280 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	PTCHD1	Q96NR3	888 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	RHOXF2	Q9BQY4	288 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	CD244	Q9BZW8	370 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	ZNF700	Q9H0M5	742 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	COPG1	Q9Y678	874 aa	Known RBP	10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	SPACA6	W5XKT8	324 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	MYO18B	Q8IUG5	2567 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	SHANK1	Q9Y566	2161 aa		10.04	□□□□□ -0.8
CDK11A-222	ENST00000498810	LOC102723996	A0A087X1L8	192 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810		K7EPI3	171 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	TAPBP	O15533	448 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	SMIM24	O75264	130 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	CLEC3A	O75596	197 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	AGFG2	O95081	481 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	KLHL2	O95198	593 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	WISP3	O95389	354 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	F10	P00742	488 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	C1QA	P02745	245 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	C2	P06681	752 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	CELA2A	P08217	269 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	ITGAM	P11215	1152 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	GNLY	P22749	145 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	CNTF	P26441	200 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	UQCRFS1	P47985	274 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	PIK3CG	P48736	1102 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	PLA2G16	P53816	162 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810		Q0VFX4	171 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	SLC13A2	Q13183	592 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	DOC2A	Q14183	400 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	ACAP2	Q15057	778 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	PFKFB4	Q16877	469 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	TSNAXIP1	Q2TAA8	658 aa		10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	PLEKHN1	Q494U1	663 aa	Predicted RBP	10.03	□□□□□ -0.8
CDK11A-222	ENST00000498810	XP32	Q5T750	250 aa		10.03	□□□□□ -0.8

Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms