RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 ZZZ3Q8IYH5 903 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 TBC1D19Q8N5T2 526 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 SLC5A11Q8WWX8 675 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 SREK1Q8WXA9 508 aaKnown RBP13.66□□□□□ -0.22
TRAF4-212ENST00000498540 HIST1H2AHQ96KK5 128 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 SMC6Q96SB8 1091 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 HIST1H2AJQ99878 128 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 FAM167BQ9BTA0 163 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 H2AFJQ9BTM1 129 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 TTTY12Q9BZ98 90 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 CLK4Q9HAZ1 481 aaKnown RBP13.66□□□□□ -0.22
TRAF4-212ENST00000498540 SLC24A3Q9HC58 644 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 XAB2Q9HCS7 855 aaKnown RBP13.66□□□□□ -0.22
TRAF4-212ENST00000498540 HPF1Q9NWY4 346 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 Q9UFV3 132 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 ST6GALNAC2Q9UJ37 374 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 YARS2Q9Y2Z4 477 aaKnown RBP13.66□□□□□ -0.22
TRAF4-212ENST00000498540 MMACHCQ9Y4U1 282 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 CLDN16Q9Y5I7 305 aa13.66□□□□□ -0.22
TRAF4-212ENST00000498540 KRT14P02533 472 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 GABRB3P28472 473 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 ADH7P40394 386 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 MAGEA3P43357 314 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 ZFP36L2P47974 494 aaKnown RBP13.65□□□□□ -0.22
TRAF4-212ENST00000498540 HNRNPFP52597 415 aaKnown RBP13.65□□□□□ -0.22
TRAF4-212ENST00000498540 CSHL1Q14406 222 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 TOR1AIP1Q5JTV8 583 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 TTC27Q6P3X3 843 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 IL20RBQ6UXL0 311 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 B3GNT6Q6ZMB0 384 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 C2CD4AQ8NCU7 369 aaPredicted RBP13.65□□□□□ -0.22
TRAF4-212ENST00000498540 TMEM52Q8NDY8 209 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 MCUQ8NE86 351 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 MAIP1Q8WWC4 291 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 ASB15Q8WXK1 588 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 FBXL8Q96CD0 374 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 GPATCH1Q9BRR8 931 aaKnown RBP13.65□□□□□ -0.22
TRAF4-212ENST00000498540 POLDIP3Q9BY77 421 aaKnown RBP13.65□□□□□ -0.22
TRAF4-212ENST00000498540 DLL4Q9NR61 685 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 TAS2R13Q9NYV9 303 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 MAD1L1Q9Y6D9 718 aa13.65□□□□□ -0.22
TRAF4-212ENST00000498540 ARHGAP21Q5T5U3 1957 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 A0A0G2JN53 185 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 OR14I1A6ND48 311 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 URADA6NGE7 173 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 FIGNL2A6NMB9 653 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 GLSO94925 669 aaPredicted RBP13.64□□□□□ -0.23
TRAF4-212ENST00000498540 GUCA1CO95843 209 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 IGHG3P01860 377 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 SOX3P41225 446 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 MAGEA5P43359 124 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 AP1S2P56377 157 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 HECTD2Q5U5R9 776 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 TMPRSS11BQ86T26 416 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 SLC22A16Q86VW1 577 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 GPALPP1Q8IXQ4 340 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRAF4-212ENST00000498540 TRPV3Q8NET8 790 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 MYRIPQ8NFW9 859 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 CREB3L4Q8TEY5 395 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 SIGLEC10Q96LC7 697 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 PWWP2AQ96N64 755 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 CCDC77Q9BR77 488 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 IKZF3Q9UKT9 509 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 PLEKHA6Q9Y2H5 1048 aa13.64□□□□□ -0.23
TRAF4-212ENST00000498540 PABPN1LA6NDY0 278 aaKnown RBP13.63□□□□□ -0.23
TRAF4-212ENST00000498540 WWP2O00308 870 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 BCKDKO14874 412 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 ZFAND5O76080 213 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 SERPINA6P08185 405 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 CELA3AP09093 270 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 DRD2P14416 443 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 CXCR5P32302 372 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 BTN3A2P78410 334 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RUNX2Q13950 521 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RBBP5Q15291 538 aaKnown RBP13.63□□□□□ -0.23
TRAF4-212ENST00000498540 ZNF750Q32MQ0 723 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 ARSKQ6UWY0 536 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RGS9BPQ6ZS82 235 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 TRILQ7L0X0 811 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 CLNKQ7Z7G1 428 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 TMEM251Q8N6I4 163 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 SLCO2A1Q92959 643 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RASL10BQ96S79 203 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 AIF1LQ9BQI0 150 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RBSNQ9H1K0 784 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 CLEC4MQ9H2X3 399 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-212ENST00000498540 PELI2Q9HAT8 420 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 ADAP2Q9NPF8 381 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 PRTFDC1Q9NRG1 225 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 SLC17A6Q9P2U8 582 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 MYOTQ9UBF9 498 aa13.63□□□□□ -0.23
TRAF4-212ENST00000498540 RPH3AQ9Y2J0 694 aaPredicted RBP13.63□□□□□ -0.23
TRAF4-212ENST00000498540 NCKAP5O14513 1909 aa13.62□□□□□ -0.23
TRAF4-212ENST00000498540 A0A1B0GVC2 190 aa13.62□□□□□ -0.23
TRAF4-212ENST00000498540 PROM1O43490 865 aa13.62□□□□□ -0.23
TRAF4-212ENST00000498540 FAM155BO75949 473 aa13.62□□□□□ -0.23
TRAF4-212ENST00000498540 HNRNPH1P31943 449 aaKnown RBP13.62□□□□□ -0.23
TRAF4-212ENST00000498540 HK2P52789 917 aa13.62□□□□□ -0.23
TRAF4-212ENST00000498540 HSD17B7P56937 341 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms