RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 TPT1P8Q9HAU6 139 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 NDUFAF4Q9P032 175 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CLEC4AQ9UMR7 237 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CCL27Q9Y4X3 112 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 IQCMA0A1B0GVH7 501 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 ATF6P18850 670 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 NUP62P37198 522 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 KCNJ10P78508 379 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 BCL2L1Q07817 233 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 OR2G6Q5TZ20 316 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 BHLHA9Q7RTU4 235 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 KANSL1Q7Z3B3 1105 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 TOP6BLQ8N6T0 577 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 TMEM40Q8WWA1 233 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 USP7Q93009 1102 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 WDFY2Q96P53 400 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 C1QTNF3Q9BXJ4 246 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 NKIRAS2Q9NYR9 191 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 HECAQ9UBI9 543 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 ADAMTS5Q9UNA0 930 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 BAIAP2Q9UQB8 552 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 HYKKA2RU49 373 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 C2orf81A6NN90 581 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CBX4O00257 560 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 KLK8O60259 260 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 RAMP2O60895 175 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 DDNO94850 711 aaPredicted RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 POMCP01189 267 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 EPB42P16452 691 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 IL1RNP18510 177 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 SDC1P18827 310 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 LIMK1P53667 647 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 ERVFC1P60507 584 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 RPS25P62851 125 aaKnown RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 HKDC1Q2TB90 917 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 IGSF11Q5DX21 431 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 METTL2BQ6P1Q9 378 aaKnown RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 TCEANCQ8N8B7 351 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 KLHL6Q8WZ60 621 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 C7orf34Q96L11 122 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 PAAF1Q9BRP4 392 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CDCA4Q9BXL8 241 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CD244Q9BZW8 370 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 TMEM45AQ9NWC5 275 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 PCDHGC4Q9Y5F7 938 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 SNX11Q9Y5W9 270 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CHP2O43745 196 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 KCNJ13O60928 360 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 B3GAT3O94766 335 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 HLA-EP13747 358 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CXCL3P19876 107 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 EDNRBP24530 442 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 STOMP27105 288 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 LRIF1Q5T3J3 769 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 SHFQ7M4L6 423 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 GPR150Q8NGU9 434 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 AP2M1Q96CW1 435 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 ZBED3Q96IU2 234 aaPredicted RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 C1orf74Q96LT6 269 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 UQCC2Q9BRT2 126 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 TAPBPLQ9BX59 468 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CIPCQ9C0C6 399 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 LINC00597Q9H2U6 94 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 TBC1D17Q9HA65 648 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF304Q9HCX3 659 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 RBPJLQ9UBG7 517 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 PROM1O43490 865 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 SMPD1P17405 629 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CHMP24386 653 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 HMGCLP35914 325 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 CLDN8P56748 225 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 BEX3Q00994 111 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 NCF4Q15080 339 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF782Q6ZMW2 699 aaPredicted RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 APOBEC3FQ8IUX4 373 aaKnown RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 IQCF1Q8N6M8 205 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 SRFBP1Q8NEF9 429 aaKnown RBP12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 TTLQ8NG68 377 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 OR6M1Q8NGM8 313 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 BRD7Q9NPI1 651 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 HCN3Q9P1Z3 774 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 HRH3Q9Y5N1 445 aa12.53□□□□□ -0.4
GAPVD1-220ENST00000497580 LOC285095A0A1B0GVY8 99 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 TLR4O00206 839 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SOCS7O14512 581 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SIGLEC5O15389 551 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SSNA1O43805 119 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 TRIM3O75382 744 aaPredicted RBP12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 PAHP00439 452 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 OR4Q2P0C623 313 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 DNASE1P24855 282 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 OR1E1P30953 314 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 TPMTP51580 245 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 AGFG1P52594 562 aaKnown RBP12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SIGLEC14Q08ET2 396 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 EFEMP1Q12805 493 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 TUSC1Q2TAM9 212 aa12.52□□□□□ -0.4
GAPVD1-220ENST00000497580 SERPINA11Q86U17 422 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms