RNA–Protein interactions for RNA: ENST00000495298.1

GTF3C2-213, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 2

Gene GTF3C2, Length 1,064 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-213ENST00000495298 NEIL2Q969S2 332 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 SMIM10Q96HG1 83 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 MS4A3Q96HJ5 214 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 TSNARE1Q96NA8 513 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 AARSD1Q9BTE6 412 aaKnown RBP8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 FRMD8P1Q9BZ68 369 aaPredicted RBP8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 PRDM9Q9NQV7 894 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 PNO1Q9NRX1 252 aaKnown RBP8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 KLHL42Q9P2K6 505 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 SPRR3Q9UBC9 169 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 IKZF3Q9UKT9 509 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 CBLCQ9ULV8 474 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 PPIEQ9UNP9 301 aaKnown RBP8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 ERVK-11Q9UQG0 969 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 MED12Q93074 2177 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 NINQ8N4C6 2090 aa8.73□□□□□ -1.01
GTF3C2-213ENST00000495298 TRBC2A0A5B9 178 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 A6NNC1 897 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 A8MVJ9 347 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 WWP2O00308 870 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 PFDN6O15212 129 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 IPO7O95373 1038 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 DNASE1P24855 282 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 GABRB3P28472 473 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 GRK3P35626 688 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 KIR2DL3P43628 341 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CCR8P51685 355 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 DGKQP52824 942 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CDKN2DP55273 166 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 RUNX2Q13950 521 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CCNG2Q16589 344 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 RBM20Q5T481 1227 aaKnown RBP8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 UGT3A1Q6NUS8 523 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 PAQR3Q6TCH7 311 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 PAMR1Q6UXH9 720 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CLNKQ7Z7G1 428 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 OR56A3Q8NH54 315 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CREB3L4Q8TEY5 395 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 VMP1Q96GC9 406 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 SNF8Q96H20 258 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 SCYL1Q96KG9 808 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 RASL10BQ96S79 203 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 CSF3RQ99062 836 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 SH3GL2Q99962 352 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 PCBD2Q9H0N5 130 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 PARVBQ9HBI1 364 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 HPF1Q9NWY4 346 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 SLC17A6Q9P2U8 582 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 ZFP69BQ9UJL9 534 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 COL6A5A8TX70 2615 aa8.72□□□□□ -1.01
GTF3C2-213ENST00000495298 ANK3Q12955 4377 aaKnown RBP8.71□□□□□ -1.01
GTF3C2-213ENST00000495298 A0A1B0GVC2 190 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ATP6AP2A0A1C7CYW4 349 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 A0A1W2PPR1 153 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FIGNL2A6NMB9 653 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 GOLGA8MH3BSY2 632 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 BCKDKO14874 412 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ATP6AP2O75787 350 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ATE1O95260 518 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 CCL3P10147 92 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 RNH1P13489 461 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FOSL1P15407 271 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 UQCRC1P31930 480 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 HK2P52789 917 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 REEP5Q00765 189 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 RGS1Q08116 209 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 KIF5AQ12840 1032 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 THOC5Q13769 683 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 TOR1AIP1Q5JTV8 583 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 C1orf185Q5T7R7 199 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 DRICH1Q6PGQ1 229 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ADGRD1Q6QNK2 874 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ABHD13Q7L211 337 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FAM109AQ8N4B1 249 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FAM47BQ8NA70 645 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 SLC5A11Q8WWX8 675 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ASB15Q8WXK1 588 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 MBD6Q96DN6 1003 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ARSGQ96EG1 525 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 LINGO1Q96FE5 620 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FAM129AQ9BZQ8 928 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 CCDC68Q9H2F9 335 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ALKBH4Q9NXW9 302 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 TUBA8Q9NY65 449 aaPredicted RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 MYOTQ9UBF9 498 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 TRMT6Q9UJA5 497 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 METRNQ9UJH8 293 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 FBXO5Q9UKT4 447 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 YARS2Q9Y2Z4 477 aaKnown RBP8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ARID1AO14497 2285 aa8.71□□□□□ -1.02
GTF3C2-213ENST00000495298 ATRQ13535 2644 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 FBN1P35555 2871 aaKnown RBP8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 OR14I1A6ND48 311 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 ACOT7O00154 380 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 PSMD12O00232 456 aaPredicted RBP8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 CLDN4O14493 209 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 AQP7O14520 342 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 GUCA1CO95843 209 aa8.7□□□□□ -1.02
GTF3C2-213ENST00000495298 TBX6O95947 436 aaPredicted RBP8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms