RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 JAK1P23458 1154 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 ATP5A1P25705 553 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 HPDP32754 393 aaPredicted RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 HNRNPFP52597 415 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 MTTPP55157 894 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 CDH13P55290 713 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 LIM2P55344 173 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 TLE1Q04724 770 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 TRAF3Q13114 568 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 ZRSR2Q15696 482 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 ERCC6LQ2NKX8 1250 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 UNC50Q53HI1 259 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 SFT2D3Q587I9 215 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 KHDRBS2Q5VWX1 349 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 PLAG1Q6DJT9 500 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 TRIM40Q6P9F5 258 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 QSOX2Q6ZRP7 698 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 RIPOR1Q6ZS17 1223 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 CHSY3Q70JA7 882 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 MYLK4Q86YV6 388 aaPredicted RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 BRIX1Q8TDN6 353 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 KCNC2Q96PR1 638 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 MTERF1Q99551 399 aaKnown RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 TBCDQ9BTW9 1192 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 PARD6BQ9BYG5 372 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 TRIM4Q9C037 500 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 DMRT3Q9NQL9 472 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 PRDM9Q9NQV7 894 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 PSD3Q9NYI0 1048 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 C19orf25Q9UFG5 118 aaPredicted RBP13.5□□□□□ -0.25
SCAP-213ENST00000494938 ZNF225Q9UK10 706 aa13.5□□□□□ -0.25
SCAP-213ENST00000494938 SMIM23A6NLE4 172 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 PSMD12O00232 456 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 FOXE1O00358 373 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 SORBS2O94875 1100 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 ETHE1O95571 254 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 TSPAN8P19075 237 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 ATP5F1P24539 256 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 PTX3P26022 381 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 CERS1P27544 350 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 SOX11P35716 441 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 CCNG1P51959 295 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 PRKAA2P54646 552 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 MLLT10P55197 1068 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 RAB38P57729 211 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 OR4D2P58180 307 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 RPS13P62277 151 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 ACTN3Q08043 901 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 TGM3Q08188 693 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 DDX39BQ13838 428 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 IGFBP7Q16270 282 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 ZNF678Q5SXM1 525 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 SLC6A19Q695T7 634 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 OR4C11Q6IEV9 310 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 MILR1Q7Z6M3 343 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 SCUBE1Q8IWY4 988 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 ACOT4Q8N9L9 421 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 SRFBP1Q8NEF9 429 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 M1APQ8TC57 530 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 CAVIN3Q969G5 261 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 ATP6V1E2Q96A05 226 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 MTFMTQ96DP5 389 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 MAPKAP1Q9BPZ7 522 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 SORBS1Q9BX66 1292 aaKnown RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 SEMA4BQ9NPR2 832 aaPredicted RBP13.49□□□□□ -0.25
SCAP-213ENST00000494938 PTGFRNQ9P2B2 879 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 DAPP1Q9UN19 280 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 CSAG2Q9Y5P2 127 aa13.49□□□□□ -0.25
SCAP-213ENST00000494938 A0A088AWK7 358 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 TCRBV16S1A1N1A0A5B0 115 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 G3V2L1 256 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 TGFBR3LH3BV60 316 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 PLPP1O14494 284 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 SCELO95171 688 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 NUDT17P0C025 328 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 TAC1P20366 129 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 IMPDH1P20839 514 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 ZNF10P21506 573 aaPredicted RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 HIST1H1TP22492 207 aaPredicted RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 CRHR1P34998 444 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 HERVK_113P63132 956 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 SLC18A2Q05940 514 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 MFAP5Q13361 173 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 AP5B1Q2VPB7 878 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 CRB2Q5IJ48 1285 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 IRAK1BP1Q5VVH5 260 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 FAM219BQ5XKK7 198 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 B3GNTL1Q67FW5 361 aaPredicted RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 H3F3CQ6NXT2 135 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 EMBQ6PCB8 327 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 PAPD4Q6PIY7 484 aaKnown RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 ISLR2Q6UXK2 745 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 LINC00696Q6ZRV3 163 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 Q6ZS92 163 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 ZADH2Q8N4Q0 377 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 SIRT6Q8N6T7 355 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 NFAM1Q8NET5 270 aaPredicted RBP13.48□□□□□ -0.25
SCAP-213ENST00000494938 OR4F6Q8NGB9 312 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 TRPC4APQ8TEL6 797 aa13.48□□□□□ -0.25
SCAP-213ENST00000494938 PNPLA2Q96AD5 504 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms