RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 CCT6BQ92526 530 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 CCDC77Q9BR77 488 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 NSMCE4AQ9NXX6 385 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 GPRC5BQ9NZH0 403 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 COQ3Q9NZJ6 369 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 ZNF223Q9UK11 482 aaPredicted RBP21.66■■□□□ 1.06
COL27A1-208ENST00000494780 MRPS33Q9Y291 106 aaKnown RBP21.66■■□□□ 1.06
COL27A1-208ENST00000494780 CLDN16Q9Y5I7 305 aa21.66■■□□□ 1.06
COL27A1-208ENST00000494780 A0A1B0GTH9 108 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 B3GALT2O43825 422 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 CLEC3AO75596 197 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 SEC31AO94979 1220 aaKnown RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 TFEBP19484 476 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 HNRNPH1P31943 449 aaKnown RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 HPDP32754 393 aaPredicted RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 GPR143P51810 404 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 PDIA2Q13087 525 aaKnown RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 C18orf21Q32NC0 220 aaPredicted RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 CEP97Q8IW35 865 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 ACBD4Q8NC06 268 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 FBXO36Q8NEA4 188 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 CA5BP1Q8WTZ4 195 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 NCLNQ969V3 563 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 SDCCAG3Q96C92 435 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 C14orf79Q96F83 325 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 QRFPRQ96P65 431 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 ENKD1Q9H0I2 346 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 RHOJQ9H4E5 214 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 TIMMDC1Q9NPL8 285 aa21.65■■□□□ 1.06
COL27A1-208ENST00000494780 YARS2Q9Y2Z4 477 aaKnown RBP21.65■■□□□ 1.06
COL27A1-208ENST00000494780 A0A0G2JN53 185 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 TGFBR3LH3BV60 316 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 HS6ST1O60243 411 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 ZFAND5O76080 213 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 TPOP07202 933 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 RFC3P40938 356 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 SSR4P51571 173 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 SLC13A2Q13183 592 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 ADPRMQ3LIE5 342 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 CMPK2Q5EBM0 449 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 MDGA2Q7Z553 956 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 GPALPP1Q8IXQ4 340 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 TCAIMQ8N3R3 496 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 OR2L5Q8NG80 312 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 MCMBPQ9BTE3 642 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 DERL2Q9GZP9 239 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 EHD1Q9H4M9 534 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 ADAP2Q9NPF8 381 aa21.64■■□□□ 1.05
COL27A1-208ENST00000494780 ANKDD1BA6NHY2 528 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 E7ESA3 106 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TP73O15350 636 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TUBB4AP04350 444 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 PPP2R1BP30154 601 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 HNRNPFP52597 415 aaKnown RBP21.63■■□□□ 1.05
COL27A1-208ENST00000494780 FASTKD3Q14CZ7 662 aaKnown RBP21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TGFBIQ15582 683 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TRIM40Q6P9F5 258 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 CD163Q86VB7 1156 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TMEM132CQ8N3T6 1108 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 FAM47BQ8NA70 645 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TMEM52Q8NDY8 209 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 CAPZA3Q96KX2 299 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 SERINC2Q96SA4 455 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 REXO4Q9GZR2 422 aaKnown RBP21.63■■□□□ 1.05
COL27A1-208ENST00000494780 PLSCR2Q9NRY7 297 aa21.63■■□□□ 1.05
COL27A1-208ENST00000494780 TRMT1Q9NXH9 659 aaKnown RBP21.63■■□□□ 1.05
COL27A1-208ENST00000494780 NCF1BA6NI72 391 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 NCF1CA8MVU1 366 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CDC40O60508 579 aaKnown RBP eCLIP21.62■■□□□ 1.051e-14■■■□□ 15.1
COL27A1-208ENST00000494780 TBX6O95947 436 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 NCF1P14598 390 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CAPN3P20807 821 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 GGT5P36269 586 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 PLA2G16P53816 162 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 SLC12A2P55011 1212 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 MTTPP55157 894 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 GPR85P60893 370 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 POU4F1Q01851 419 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CBLBQ13191 982 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 RCN2Q14257 317 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 ELAVL1Q15717 326 aaKnown RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CDKL4Q5MAI5 379 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 TMEM211Q6ICI0 200 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 ARHGAP11AQ6P4F7 1023 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CREG2Q8IUH2 290 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CHTF18Q8WVB6 975 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 TREX2Q9BQ50 279 aaPredicted RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 CNOT10Q9H9A5 744 aaKnown RBP21.62■■□□□ 1.05
COL27A1-208ENST00000494780 DNAJC11Q9NVH1 559 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 KCMF1Q9P0J7 381 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 ERVK-11Q9UQG0 969 aa21.62■■□□□ 1.05
COL27A1-208ENST00000494780 A8MVJ9 347 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 CYR61O00622 381 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 CLGNO14967 610 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 TAPBPO15533 448 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 PRKNO60260 465 aaPredicted RBP21.61■■□□□ 1.05
COL27A1-208ENST00000494780 WISP3O95389 354 aaPredicted RBP21.61■■□□□ 1.05
COL27A1-208ENST00000494780 LIM2P55344 173 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 ABHD17CQ6PCB6 329 aa21.61■■□□□ 1.05
COL27A1-208ENST00000494780 VN1R5Q7Z5H4 357 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms