RNA–Protein interactions for RNA: ENST00000494163.1

IFT172-215, Transcript of intraflagellar transport 172, human

TSL 3

Gene IFT172, Length 607 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IFT172-215	ENST00000494163	LAPTM4B	Q86VI4	370 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	SHISA5	Q8N114	240 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	ANKRD42	Q8N9B4	389 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	ACOT4	Q8N9L9	421 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	OR6Y1	Q8NGX8	325 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	PPP1R14C	Q8TAE6	165 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	TBC1D20	Q96BZ9	403 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	ATP6V1G3	Q96LB4	118 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	KCNA7	Q96RP8	456 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	SH3GL2	Q99962	352 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	SHCBP1L	Q9BZQ2	653 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	BRF2	Q9HAW0	419 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	EML4	Q9HC35	981 aa	Known RBP	13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	FARSB	Q9NSD9	589 aa	Known RBP	13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	NMRK1	Q9NWW6	199 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	MKL2	Q9ULH7	1088 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	TIMM22	Q9Y584	194 aa		13.59	□□□□□ -0.23
IFT172-215	ENST00000494163	WDR91	A4D1P6	747 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	PSMD12	O00232	456 aa	Predicted RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	PLPP1	O14494	284 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	SASH3	O75995	380 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	SEMA3D	O95025	777 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	FH	P07954	510 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	CYC1	P08574	325 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	UROS	P10746	265 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	HSD3B1	P14060	373 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	HIST1H1T	P22492	207 aa	Predicted RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	JAK1	P23458	1154 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	HSD3B2	P26439	372 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	HTR6	P50406	440 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	FOXA1	P55317	472 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	RAB38	P57729	211 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	CSTF3	Q12996	717 aa	Known RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	RCN2	Q14257	317 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	TUBB8	Q3ZCM7	444 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	MINDY4	Q4G0A6	757 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	ARL13A	Q5H913	290 aa	Predicted RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	MFSD4B	Q5TF39	518 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	HHAT	Q5VTY9	493 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	FAM219B	Q5XKK7	198 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	PPP1R32	Q7Z5V6	425 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	MRGPRE	Q86SM8	312 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	GBP7	Q8N8V2	638 aa	Predicted RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	PAIP2	Q9BPZ3	127 aa	Known RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	SORBS1	Q9BX66	1292 aa	Known RBP	13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	RBCK1	Q9BYM8	510 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	MLXIPL	Q9NP71	852 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	TNFRSF12A	Q9NP84	129 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	LANCL2	Q9NS86	450 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	NKIRAS1	Q9NYS0	192 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	AHSP	Q9NZD4	102 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	SLC12A4	Q9UP95	1085 aa		13.58	□□□□□ -0.24
IFT172-215	ENST00000494163	SERTM1	A2A2V5	107 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	PEX12	O00623	359 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	PCDH17	O14917	1159 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	AZIN1	O14977	448 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ITGB2	P05107	769 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	SERPINE1	P05121	402 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	CHRNG	P07510	517 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	NEFH	P12036	1026 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	SERPINB3	P29508	390 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	BSG	P35613	385 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	LIM2	P55344	173 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	RHD	Q02161	417 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ATP1A4	Q13733	1029 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	TBR1	Q16650	682 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	TTMP	Q5BVD1	217 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	MED25	Q71SY5	747 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	HOMEZ	Q8IX15	550 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ZCCHC7	Q8N3Z6	543 aa	Known RBP	13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	PLPP5	Q8NEB5	264 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ADAMTS18	Q8TE60	1221 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	VPS50	Q96JG6	964 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	HBEGF	Q99075	208 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ZNF717	Q9BY31	904 aa	Predicted RBP	13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	VN1R1	Q9GZP7	353 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	ACBD3	Q9H3P7	528 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	LYRM4	Q9HD34	91 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	DAPP1	Q9UN19	280 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	LHX6	Q9UPM6	363 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	MAN2B2	Q9Y2E5	1009 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	HS3ST3B1	Q9Y662	390 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	CCDC88C	Q9P219	2028 aa		13.57	□□□□□ -0.24
IFT172-215	ENST00000494163	HMGB1P1	B2RPK0	211 aa	Predicted RBP	13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	FAM227A	F5H4B4	570 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	SOCS6	O14544	535 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	B4GALT2	O60909	372 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	ALOX12B	O75342	701 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	CDC123	O75794	336 aa	Predicted RBP	13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	FGF4	P08620	206 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	EFNA3	P52797	238 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	WDR4	P57081	412 aa	Known RBP	13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	SLAMF1	Q13291	335 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	ABRAXAS2	Q15018	415 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	CHI3L2	Q15782	390 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	BORA	Q6PGQ7	559 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	TMEM205	Q6UW68	189 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	KIRREL2	Q6UWL6	708 aa		13.56	□□□□□ -0.24
IFT172-215	ENST00000494163	PAGE2	Q7Z2X7	111 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms