RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 Q6ZVU0 165 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 NRROSQ86YC3 692 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 C7orf61Q8IZ16 206 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 GLIS1Q8NBF1 620 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 G6PC3Q9BUM1 346 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 TAS2R9Q9NYW1 312 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 UBQLN2Q9UHD9 624 aa19.41■□□□□ 0.7
RNF40-203ENST00000493683 C13orf42A0A1B0GVH6 325 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 CNTN5O94779 1100 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 BCKDHAP12694 445 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 NPR2P20594 1047 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 RBMXP38159 391 aaKnown RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 GPAT4Q86UL3 456 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 TXNDC5Q8NBS9 432 aaKnown RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 OR8J1Q8NGP2 316 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 HSPA12BQ96MM6 686 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 KCNAB2Q13303 367 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 EOGTQ5NDL2 527 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 KLK6Q92876 244 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 ADAM7Q9H2U9 754 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 OR51B5Q9H339 312 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 PTGES2Q9H7Z7 377 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 VRTNQ9H8Y1 702 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 KLRF1Q9NZS2 232 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 EXTL2Q9UBQ6 330 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 MTX2O75431 263 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 SOX14O95416 240 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 PRKACGP22612 351 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 GDF5P43026 501 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 GDI2P50395 445 aaKnown RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 POU6F2P78424 691 aaPredicted RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 TMEM164Q5U3C3 297 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 NOXRED1Q6NXP6 359 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 SLC39A4Q6P5W5 647 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 OR2T33Q8NG76 320 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 OTUB2Q96DC9 234 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 CCDC86Q9H6F5 360 aaKnown RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 PREBQ9HCU5 417 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 SRRDQ9UH36 339 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 TMEM14AQ9Y6G1 99 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 SDHDO14521 159 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 ADH1BP00325 375 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 GNAO1P09471 354 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 S1PR1P21453 382 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 RPS3P23396 243 aaKnown RBP eCLIP19.4■□□□□ 0.7
RNF40-203ENST00000493683 ZNF41P51814 821 aaPredicted RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 CAPZA1P52907 286 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 GSTM4Q03013 218 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 TECRLQ5HYJ1 363 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 UBE2Q1Q7Z7E8 422 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 CCDC28AQ8IWP9 274 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 PM20D2Q8IYS1 436 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 PHOSPHO1Q8TCT1 267 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 DDX1Q92499 740 aaKnown RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 NSMAFQ92636 917 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 TRIM43Q96BQ3 446 aaPredicted RBP19.4■□□□□ 0.7
RNF40-203ENST00000493683 MUS81Q96NY9 551 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 SMURF1Q9HCE7 757 aa19.4■□□□□ 0.7
RNF40-203ENST00000493683 RPS3AP61247 264 aaKnown RBP19.39■□□□□ 0.7
RNF40-203ENST00000493683 CRHR2Q13324 411 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 CMPK2Q5EBM0 449 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 CNKSR3Q6P9H4 555 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 GKN2Q86XP6 184 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 LRIG1Q96JA1 1093 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 SMOQ99835 787 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 OR2B2Q9GZK3 357 aa19.39■□□□□ 0.7
RNF40-203ENST00000493683 HLCSP50747 726 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 BTBD16Q32M84 506 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 ASCC1Q8N9N2 400 aaKnown RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 OR6N1Q8NGY5 312 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 TMEM234Q8WY98 164 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 HS6ST2Q96MM7 605 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 KCNIP3Q9Y2W7 256 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 SMCO3A2RU48 225 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 LRRTM2O43300 516 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 ZNF821O75541 412 aaPredicted RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 TCEA1P23193 301 aaKnown RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 KCNQ1P51787 676 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 MOGSQ13724 837 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 ABRAXAS2Q15018 415 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 CDK10Q15131 360 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 TRUB1Q8WWH5 349 aaKnown RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 ALKBH4Q9NXW9 302 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 GLS2Q9UI32 602 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 PRELID1Q9Y255 219 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 RIMBP3CA6NJZ7 1639 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 RIMBP3BA6NNM3 1639 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 RIMBP3Q9UFD9 1639 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 CLCA1A8K7I4 914 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 ARVCFO00192 962 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 DENRO43583 198 aaKnown RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 VNN2O95498 520 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 CD1DP15813 335 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 LASP1Q14847 261 aaKnown RBP19.39■□□□□ 0.69
RNF40-203ENST00000493683 UBQLNLQ8IYU4 475 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 OR4K14Q8NGD5 310 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 PLEKHO2Q8TD55 490 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 ENY2Q9NPA8 101 aa19.39■□□□□ 0.69
RNF40-203ENST00000493683 NOX1Q9Y5S8 564 aa19.39■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms